Transcript Information: R_Transcript_161480.p1


Annotated TAIR IDAT2G38710.1
Annotated Gene NameAMMECR1 family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16184517-16186764 | Reverse length=214
E-Value2E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.608489659267
Replicate 222.834686167034
Replicate 326.8124946978
Condition 2: 8 Hour
Replicate 128.999388439825
Replicate 236.272029530402
Replicate 340.903859877277
Condition 3: 24 Hour
Replicate 139.779426348464
Replicate 230.28786704789
Replicate 337.219184467581


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161480.p1 GENE.R_Transcript_161480~~R_Transcript_161480.p1 ORF type:5prime_partial len:217 (+),score=33.47,AMMECR1|PF01871.13|8.8e-50 R_Transcript_161480:1-651(+)
AGAAAAAGGAAGAAAATGGTGTCGGCAAAAAGGGAGATGGCTGTGTACTGCTTTGACACACTTGTAGCTCACTACAATGGCGACCAACCTCCTCCTCCTGCTTTTGAGGAGGGTCACCACCCACTATTTGTTACCTGGAAGAAAGTGGTGTATGGAGGTGACCCTCGTCTCCGTGGCTGCATTGGGACTCTTGAACCCCGTGACATTATCAATGGTTTTAAAGACTATGCTCTTACAAGTGCACTGAGAGATCGTCGTTTCCCCCCGATTCAGGCTAAAGAGTTACCTCATTTGGAATGTACCGTTTCTATTCTAACTGAATATGAGACTGCCATGAACCACCTTGACTGGGAGGTAGGAAAGCATGGTATAATAATTGAATTCACTGATCCAGACTACAATACCAGGCGAAGTGCCACATACTTACCTGACGTTGCTGCTCAAGAAGGTTGGACAAAGATCGAGGCCATTGATTCTTTAATGCGTAAGGCAGGTTACAATGGCGTCACAACAGATTCAATTCGGAAGCGCATTCGGTTAACTCGTTACCAGAGCACAGCATTTACAATGCACTACAGTGAGTACATTGCTCATGTGAAGGATACCAGAGGCACGGTTCCTGCTATTAACGGGTTGAAGCCTGGCAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161480.p1 GENE.R_Transcript_161480~~R_Transcript_161480.p1 ORF type:5prime_partial len:217 (+),score=33.47,AMMECR1|PF01871.13|8.8e-50 R_Transcript_161480:1-651(+)
RKRKKMVSAKREMAVYCFDTLVAHYNGDQPPPPAFEEGHHPLFVTWKKVVYGGDPRLRGCIGTLEPRDIINGFKDYALTSALRDRRFPPIQAKELPHLECTVSILTEYETAMNHLDWEVGKHGIIIEFTDPDYNTRRSATYLPDVAAQEGWTKIEAIDSLMRKAGYNGVTTDSIRKRIRLTRYQSTAFTMHYSEYIAHVKDTRGTVPAINGLKPGN*

Click here to download the sequence:
Link to NCBI Protein BLAST