Transcript Information: R_Transcript_161483.p1


Annotated TAIR IDAT2G38710.1
Annotated Gene NameAMMECR1 family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16184517-16186764 | Reverse length=214
E-Value4.3E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5645395104045
Replicate 22.9994714880426
Replicate 31.5271158397435
Condition 2: 8 Hour
Replicate 12.3319871378329
Replicate 23.6203332504777
Replicate 33.7167583651269
Condition 3: 24 Hour
Replicate 13.3890096383754
Replicate 23.0457262277464
Replicate 33.126814955271


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161483.p1 GENE.R_Transcript_161483~~R_Transcript_161483.p1 ORF type:5prime_partial len:210 (+),score=30.28,AMMECR1|PF01871.13|8.4e-38 R_Transcript_161483:1-630(+)
AGAAAAAGGAAGAAAATGGTGTCGGCAAAAAGGGAGATGGCTGTGTACTGCTTTGACACACTTGTAGCTCACTACAATGGCGACCAACCTCCTCCTCCTGCTTTTGAGGAGGGTCACCACCCACTATTTGTTACCTGGAAGAAAGTGGTGTATGGAGGTGACCCTCGTCTCCGTGGCTGCATTGGGACTCTTGAACCCCGTGACATTATCAATGGTTTTAAAGACTATGCTCTTACAAGTGCACTGAGAGATCGTCGTTTCCCCCCGATTCAGGCTAAAGAGTTACCTCATTTGGAATGTACCGTTTCTATTCTAACTGAATATGAGACTGCCATGAACCACCTTGACTGGGAGGTAGGAAAGCATGGTATAATAATTGAATTCACTGATCCAGACTACAATACCAGGCGAAGTGCCACATACTTACCTGACGTTGCTGCTCAAGAAGGTGAGTGGCATTGCTTATTGTTTACCATAAGAACTTCTTGTGAGCCTTTTATCCCCATATCCTCTTTGTTACCCCATAAGCGGCCATTCACCATGGTTTTCAGACTTAGAATTGTTATGGAGAACAATAAAAATACTCTTGTTGAGAAAGGTTTGTTAGATCAAAACCTTTATTTTCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161483.p1 GENE.R_Transcript_161483~~R_Transcript_161483.p1 ORF type:5prime_partial len:210 (+),score=30.28,AMMECR1|PF01871.13|8.4e-38 R_Transcript_161483:1-630(+)
RKRKKMVSAKREMAVYCFDTLVAHYNGDQPPPPAFEEGHHPLFVTWKKVVYGGDPRLRGCIGTLEPRDIINGFKDYALTSALRDRRFPPIQAKELPHLECTVSILTEYETAMNHLDWEVGKHGIIIEFTDPDYNTRRSATYLPDVAAQEGEWHCLLFTIRTSCEPFIPISSLLPHKRPFTMVFRLRIVMENNKNTLVEKGLLDQNLYFL*

Click here to download the sequence:
Link to NCBI Protein BLAST