Transcript Information: R_Transcript_16153.p1


Annotated TAIR IDAT3G52260.3
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19383452-19386440 | Reverse length=416
E-Value3.9E-152
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.923305139776
Replicate 211.739866899435
Replicate 313.670149855768
Condition 2: 8 Hour
Replicate 110.334088163219
Replicate 28.9563747159587
Replicate 310.100493006506
Condition 3: 24 Hour
Replicate 111.664047220527
Replicate 29.7232861775663
Replicate 311.120366090924


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16153.p1 GENE.R_Transcript_16153~~R_Transcript_16153.p1 ORF type:complete len:372 (+),score=61.19,PseudoU_synth_2|PF00849.18|9.1e-24 R_Transcript_16153:54-1169(+)
ATGTCGACGACTACGAAAACCACCACCACCACCATCATTGGAATACCTTGGCCTGAATTCAACGATGGCCTCTCTTACGACGACGTCGTTTCTCCTTCTCATTCTGGGTTTACTCTCATCGATTTCTACTCAACCAATCACAAAACCTCAGCCCCCTTGCAAGGTTGGTTGCAGCGAATCCAAAATGGGCAGATTAAGATCGATGGCGAAACTGTTACTGATCCCAACACAATTCTCAGAGCTAGGTCAGAGTTGGTGTATCATAGACTCCCATGGAAGGAGCCTGAAACACCTTACTTGATCGAGGTGTTGTATGAAGATGATGATATGATCGCTTTGAATAAGCCATCTGGCCTGCAAGTCTTACCTGGAGGACTCTTCCAGCAGCGCACTGTCTTAACACAGCTTCAATGGCATGCAGACGAGATTAGCAATTTACCATCTGGGCAAGGTCGTCATCCTGTTCCTGTTCACCGCCTTGGCAGGGGCACATCAGGATTGCTCCTTTGTGCAAAGACAAAACAGGCAAAGGCTCACCTTGCCGCATATTTTGCTGATGGAACATCGTTGGTGAGAGAAAAAAGAGAGATAAACTTAGAACTTCAAGTGGGGCGAAAGATTACCAAGATATATCGGGCACTAGTCAAGGGGATAGTAGATTTGGATGAGATTGTAATCAACCAGCCAATTGGAACAATGCGATATCCTGGTGTGGCAAGGGGTCTTTATGCTGCATTGCCCTCAGGTAAACCAGCATTGAGCAAAGTACAGGTCCTTGAAAGAGATCTAGAGAAAGATCAGACACTAGTCCAGGTGGAGATACAGTCAGGAAGGCCTCATCAAATCCGCATACATCTTTCTTTAATAGGGCATCCACTAATAGGTGATCCTCTTTATGTTGCTGGTGGCCAACCAAAGTGCTTCGACTCTGAACCAGTAGAAGAAAGTTTTGCGGAAGATGGAGGGTACCAACGTCCTGCAAAGCCAGTACCAGGAGATTGTGGGTATCACCTGCATGCACATGAAGTAACTCTTTACCACCCAACCACAGATGAGGTGATGAAGATCTTTGCACCGCTGCCTCCCGTGCTCAAGACAATGGAAGAGGCCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16153.p1 GENE.R_Transcript_16153~~R_Transcript_16153.p1 ORF type:complete len:372 (+),score=61.19,PseudoU_synth_2|PF00849.18|9.1e-24 R_Transcript_16153:54-1169(+)
MSTTTKTTTTTIIGIPWPEFNDGLSYDDVVSPSHSGFTLIDFYSTNHKTSAPLQGWLQRIQNGQIKIDGETVTDPNTILRARSELVYHRLPWKEPETPYLIEVLYEDDDMIALNKPSGLQVLPGGLFQQRTVLTQLQWHADEISNLPSGQGRHPVPVHRLGRGTSGLLLCAKTKQAKAHLAAYFADGTSLVREKREINLELQVGRKITKIYRALVKGIVDLDEIVINQPIGTMRYPGVARGLYAALPSGKPALSKVQVLERDLEKDQTLVQVEIQSGRPHQIRIHLSLIGHPLIGDPLYVAGGQPKCFDSEPVEESFAEDGGYQRPAKPVPGDCGYHLHAHEVTLYHPTTDEVMKIFAPLPPVLKTMEEAR*

Click here to download the sequence:
Link to NCBI Protein BLAST