Transcript Information: R_Transcript_161579.p1


Annotated TAIR IDAT2G15790.1
Annotated Gene Namepeptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase
Annotated Gene Symbol(s)SQN, CYP40
Annotation TypeOrtholog
Chromosome Positionchr2:6878144-6880743 | Reverse length=361
E-Value1.3E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.898496413234
Replicate 29.1258429913975
Replicate 311.0790757001
Condition 2: 8 Hour
Replicate 111.282702475691
Replicate 212.130413024957
Replicate 314.889066227834
Condition 3: 24 Hour
Replicate 116.655664067158
Replicate 212.901605690893
Replicate 317.595997885545


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161579.p1 GENE.R_Transcript_161579~~R_Transcript_161579.p1 ORF type:internal len:306 (-),score=80.28,Pro_isomerase|PF00160.17|4.1e-45,TPR_11|PF13414.2|1.7e-05 R_Transcript_161579:3-917(-)
GGGGGTAGGCCAAAGTGTTATTTGGACATAAGCATTGGAGGAGAACTTGAAGGCCGGATTGTGGTTGAGTTGTATGATGATGTCGTTCCCAAAACTGCTGAGAATTTCAGGGCTCTTTGTACTGGTGAAATGGGCATTTCCCCCCACTCTTGTCTTCCCCTTCACTACAAGGGTGTACGTTTCCATCGGATTATTAAAGGGGCACTGATTCAAGGTGGAGACATATCAGCTGGGGGTGAAAGTGGTGGAGAGTCCATCTATGGTCCGCGTTTTGATGATGAAAATTTTGAGCTGAGGCATGAGCGGAAGGGAATGTTGTCCATGGTCAGTTCTGGCCCCAATACCAATGGATCCCAGTTCTTCATTACCACCACCCAAGCTCATCATCTTGATGGAAAGTGTGTGGTGTTTGGGAGAGTGATCAAAGGTTTGGGGGTGATTCGTTCAATTGAGCATGTTGATATTGAAAGTGAGGGTCATCCATCACTTGATATCGTCATTGAGGACTGTGGAGTAATCCCTGAAGGGGCAGATTATGGGATCATTAACTTTTTCAAAGATGGGGACACTTATCCTGATTCGATATCTGACCTTGATGCAAAATCGGATGATTTCTCATGGTGGGTTACTGCAATTGATGGCATTAAGGCCTTTGGCAATGAGAAGTTCAAGAAGCAAGATTATAAGTTGGCTATTCGCAAATATCACAAAGCTTTGCGATACTTGGATACATGCTGGGATATGGAGACAATAGATGGAGAAAAGAGCTTGACTTTGAGGAAAATGAGGTGTCAGTTAAATACAAATGTCGCGGCCTGTAAGTTGAAGATGGGAGATATAGATGGAGCCTTGTGGGATACGGAATTAGCACTTCGTGATGAAGAAGACAATGTGAAGGCTCACTTCCGAAGGGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161579.p1 GENE.R_Transcript_161579~~R_Transcript_161579.p1 ORF type:internal len:306 (-),score=80.28,Pro_isomerase|PF00160.17|4.1e-45,TPR_11|PF13414.2|1.7e-05 R_Transcript_161579:3-917(-)
GGRPKCYLDISIGGELEGRIVVELYDDVVPKTAENFRALCTGEMGISPHSCLPLHYKGVRFHRIIKGALIQGGDISAGGESGGESIYGPRFDDENFELRHERKGMLSMVSSGPNTNGSQFFITTTQAHHLDGKCVVFGRVIKGLGVIRSIEHVDIESEGHPSLDIVIEDCGVIPEGADYGIINFFKDGDTYPDSISDLDAKSDDFSWWVTAIDGIKAFGNEKFKKQDYKLAIRKYHKALRYLDTCWDMETIDGEKSLTLRKMRCQLNTNVAACKLKMGDIDGALWDTELALRDEEDNVKAHFRRG

Click here to download the sequence:
Link to NCBI Protein BLAST