Transcript Information: R_Transcript_161604.p1


Annotated TAIR IDAT5G65480.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26176827-26177434 | Forward length=153
E-Value9E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29440259604385
Replicate 20.67730001342897
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.18032969226763
Replicate 30.14638395661602
Condition 3: 24 Hour
Replicate 10.18514360667503
Replicate 20.35572998210608
Replicate 30.35302749494996


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161604.p1 GENE.R_Transcript_161604~~R_Transcript_161604.p1 ORF type:5prime_partial len:124 (+),score=2.59 R_Transcript_161604:1-372(+)
GGTGGAATAAAGCACTGGAACATTGTCAATGTTGTCCAACATGTTCTTCCTTCTGTCTTGCCTCCCTCCACGCCCACGCCCATAGCAAGGAACAAGCACACCAAAGCCACCTTCAAACTCATCCTCGCTCAAGAACCCAGGTGCGTGAGGCTCCGACCATCCGATAGACCAATCAGAATCATCCGATTCACAAACCGAGAAGCACCCTCCATCGCAAAGCACAAGCACGACATCATACTCCCTATCAATCTTTACCTCATCATGATCTTCCCATTTTTGCCTAACCCTACTAGGACTAGAAGCTTTGTTACCACTTATAGCCGAAGGAAACCTCAACAAATCCCTCTCAAGCCCATTCAATTGATCAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161604.p1 GENE.R_Transcript_161604~~R_Transcript_161604.p1 ORF type:5prime_partial len:124 (+),score=2.59 R_Transcript_161604:1-372(+)
GGIKHWNIVNVVQHVLPSVLPPSTPTPIARNKHTKATFKLILAQEPRCVRLRPSDRPIRIIRFTNREAPSIAKHKHDIILPINLYLIMIFPFLPNPTRTRSFVTTYSRRKPQQIPLKPIQLIS*

Click here to download the sequence:
Link to NCBI Protein BLAST