Transcript Information: R_Transcript_161883.p1


Annotated TAIR IDAT1G10417.1
Annotated Gene NameEncodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens.
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3424616-3427457 | Reverse length=431
E-Value2.2E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1605928930746
Replicate 20.78887833934068
Replicate 30.26481777567806
Condition 2: 8 Hour
Replicate 10.91998914541673
Replicate 20.64626826130594
Replicate 30.62953562845273
Condition 3: 24 Hour
Replicate 10.59716839609635
Replicate 20.50994818244109
Replicate 30.82237040731117


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161883.p1 GENE.R_Transcript_161883~~R_Transcript_161883.p1 ORF type:5prime_partial len:346 (+),score=83.36 R_Transcript_161883:3-1040(+)
CGTTCCACCACTGAGCAACTCCATCTCTCAATCCAGAAGCAGAAGCAATTAGAGGAGGAATTTGGGAGGAAGTTGAAGGAATTGGAATCGGAGCTTAGTTCGTCGATTGAAATGCGCCAAAAGCTGGAACGAAAGGTGAATTACCTGCAGAATGATAATGTTTTGCTAGAGAACAAGCGAGAGGAGTTGAATGCTACTATACGAAGCCTTCTTCAATCAAAAGAACACTTTATAAATGCTTATCAGGAATCCACATGTGAAATGAAAACTTCAATTGAAGCACGAGATCGGAAGCTCAAAGTCTTGAACGAAAAGCTAAAGTCTCATATAATATTGTTTGATTCTATAGAAAGGGAAGCACGATCAGTGAAGCAAGTTGTTGACAATGTGCGGCATGTCATTAGTGAAAAGGAGGAAGTAGTGACTGGCTTGAAAAGAAAAATTGGCAGGGTTTCGGAGGTTGAGGGATTATTTATTGAAAAAATTAGTGAGATGGAAATGAGGCTTACAGAATACAAGGGTGAGCTCCAAATGAGAGACAAAATGATTGGGGAGCTAGAAACAAAGCTTCAAGCAGAAAAAGTTGCTAACAATAATCAATCACAAATAGAAGAGCTTCAAAGAAGTCTATCAACAAAGGAAGCTGTCATACAGAATCTAATATCCGAGAAGCAGACTCTGGAATCAGAAGTCAAGAGTTTGGCAGCTATCTTTGAGGAAATCCAGCATTCTTTCAGAGATATGAATGAGGATAAAAATTCGTTCCCATCATTGCCTGAAAGCAAGGAAAGATGTCGCATGATTTGTGGAGAACTTGATAGGATGGAAGATTTTAAGATTATAAAGGAATGTGAATCTGGGCTGGTAGGCTCTGCTGAGGGCACAGCGTGTTCCCAACTTGATCTACATGATCGTGATGCTTACCAGTCAGCACGGATGCCAGAGAACAAGGTGGAATTGCTTGCTGAAGAGCCTGCATGCTCAACAACACAATCCGTGTGCTCAGGACCTCAATCAACTTCAAATGCTCAGGCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161883.p1 GENE.R_Transcript_161883~~R_Transcript_161883.p1 ORF type:5prime_partial len:346 (+),score=83.36 R_Transcript_161883:3-1040(+)
RSTTEQLHLSIQKQKQLEEEFGRKLKELESELSSSIEMRQKLERKVNYLQNDNVLLENKREELNATIRSLLQSKEHFINAYQESTCEMKTSIEARDRKLKVLNEKLKSHIILFDSIEREARSVKQVVDNVRHVISEKEEVVTGLKRKIGRVSEVEGLFIEKISEMEMRLTEYKGELQMRDKMIGELETKLQAEKVANNNQSQIEELQRSLSTKEAVIQNLISEKQTLESEVKSLAAIFEEIQHSFRDMNEDKNSFPSLPESKERCRMICGELDRMEDFKIIKECESGLVGSAEGTACSQLDLHDRDAYQSARMPENKVELLAEEPACSTTQSVCSGPQSTSNAQA*

Click here to download the sequence:
Link to NCBI Protein BLAST