Transcript Information: R_Transcript_16191.p1


Annotated TAIR IDAT5G10490.1
Annotated Gene NameMSCS-like 2
Annotated Gene Symbol(s)MSL2
Annotation TypeHomolog
Chromosome Positionchr5:3300376-3304005 | Reverse length=673
E-Value7E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9266350897861
Replicate 21.5946557278201
Replicate 32.1263638274909
Condition 2: 8 Hour
Replicate 12.4795812604805
Replicate 22.4530925226617
Replicate 37.1993729886767
Condition 3: 24 Hour
Replicate 14.0684721669349
Replicate 23.2571057433342
Replicate 33.9711869263147


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16191.p1 GENE.R_Transcript_16191~~R_Transcript_16191.p1 ORF type:3prime_partial len:237 (+),score=24.89 R_Transcript_16191:274-981(+)
ATGGCTCTGACCGGTTCTTTGCAATTTTCCCCCTTGTTGGGAGTTTGCAAGAACCCAGAGCGGGCCAAACACTTTAAGTATGTTTCAGGACGAGATAATCTGGATTTGTTGGCAACATCCTTATCATCCCGTGCTTCGAGACAAGATTCATGGTGTTGTCGTTTATCTACTGGTATAAACAGACCAATATGCAACCTGCCTCACAGATGCAATGTTTTGAGATGCAATTCTTTTCTATTTTTCGGCCACAACATTACAGTTCCTACTGTGAAGACTGCAACTGTTGCATTGACAAGGTCATGCAGTTCTTTGCAAAGTAGCCCCCTTGTCTGTAAGTTGGTCCCAGCTGTTAGTATTATCATCTTTGCGATATGGGGTTTGGCACCACTCATGCAAATGAGCAGAAAAATATTTTTACGTAAAACTGACAACAGCTGGAAGAAGAGTACGACCAAATTTGTGATGACCTCGTATTTGCGACCTTTGTTGCTGTGGACGGGTGCAACTTTCATCTGCAGGGCTTTGGATCCAATTGTGATGCCTACACAAGCTAGCCAGCTTGTGAAGCAAAGACTAGTAAATTTTGTTCAGTCACTTTCAACTGTGCTGGCCTTTGCCTACTGTTTGTCAAGTGTGATTCAACAAGCTCAGAAGTACTTCATGGAGACAAATGACCCCACTGATACAAGAAATATGGGTTTTCAATTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16191.p1 GENE.R_Transcript_16191~~R_Transcript_16191.p1 ORF type:3prime_partial len:237 (+),score=24.89 R_Transcript_16191:274-981(+)
MALTGSLQFSPLLGVCKNPERAKHFKYVSGRDNLDLLATSLSSRASRQDSWCCRLSTGINRPICNLPHRCNVLRCNSFLFFGHNITVPTVKTATVALTRSCSSLQSSPLVCKLVPAVSIIIFAIWGLAPLMQMSRKIFLRKTDNSWKKSTTKFVMTSYLRPLLLWTGATFICRALDPIVMPTQASQLVKQRLVNFVQSLSTVLAFAYCLSSVIQQAQKYFMETNDPTDTRNMGFQF

Click here to download the sequence:
Link to NCBI Protein BLAST