Transcript Information: R_Transcript_161919.p1


Annotated TAIR IDAT3G57660.1
Annotated Gene Namenuclear RNA polymerase A1
Annotated Gene Symbol(s)NRPA1
Annotation TypeOrtholog
Chromosome Positionchr3:21353746-21362814 | Forward length=1670
E-Value9e-316
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.62060948022972
Replicate 20.051522769219322
Replicate 31.6729595041831
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161919.p1 GENE.R_Transcript_161919~~R_Transcript_161919.p1 ORF type:3prime_partial len:868 (+),score=153.96,RNA_pol_Rpb1_2|PF00623.16|1e-57,RNA_pol_Rpb1_1|PF04997.8|1.1e-33,RNA_pol_Rpb1_1|PF04997.8|2.9e+03,RNA_pol_Rpb1_3|PF04983.14|8.6e-31 R_Transcript_161919:127-2727(+)
ATGGCGCAGACAGCTGAGCTGGCGACGGAGACGGTGGAGGCGGTTCGGTTTGGGATTATGACGGACGAGGAAGTGAGGAAGCTGAGCTTTCGGCAAATTACAAACCCTAATATCTTGGATACTCTTGGAAGGCCTGAGCATGGTGGTCTTTATGATCCTGCATTAGGTCCACTGGATGATATCCAGCCTTGTAAATCATGTGGTCAACGCTCTTTGTATTGCCCTGGACATTGTGGTCATATAAATCTTGTTTCAATAGTCTACCACCCTTTGCTCTTCAACATGCTTTATAGTCTTCTACAGAATACCTGCTTCTATTGCTTCCATTTTAGGTCAGAGCCGGCTGAGGTGAAGCTTTGTCTCTCTAAATTGAATAGCATAATGAAGGGCGACATTGTTGGAGCCAGAAGTTTAGGAATAAATAATTCTCTTTTAGAGGGACTTGGTGAATCGAAGCATGTGGATCCACGGGACTGGACTTCTTTTCAGCTTAGTGAAGCATTCTCTGTGTTGAATGGTTTCTTGAAGAAAAAAAATAAGAAATGTAGCATCTGTGATCAGAGGAATCCTGCCATCTCGAAACCTACCTTTGGTTGGATCCATATGAAAGGCTTGAGCGCTAATGATGTAAAAGCAAATCTTATCAAAAGTTGCAAGTTGGATGGTCTAGTTACTAATGGAGATGACGATGATGATAATGCTGCATCAGATGTTGAAAATCCCACATGCGAAAATGGTGGTAATGCAGATGGTTCATCTGCGTTTTCACCTACTACACGAGAATCAAAGAAGCAACAGATGAATAGGATGAAATCTGAGTATTTGAAGCAGACAAAAGCACGAGATCTCTTGCCTTCAGAAGTCAAACGGATATTAGAGATGTTATGGAAAAATGAGGCTGATATATGCTCCTTTGTATGTGATATTCAGCAACATCATGGATATGAATCTAAGAATAATGCAGGTTACTTGATGTTCTTTCTAAAGACTGTTCTTGTGCCTCCAACCAAGTTCCGTCCCCCTTCTAAAGGAGGCGAATCAGTTATGGAGCATCCTCAAACTGTTCTATTGAACAATGTTCTGAATGCTAATATATCTCTTGGAAATGTGTATGAACATCACGCTGAGCATACAAATATTATTCGTAGCTGGCGGTATCTTCAACAGTGTATAAATGTTTTGTTTGATAGCAAGAGTGCAGCAGGCCAACGAGATGTAGCTACTGGAATATGTCAATTACTGGAGAAAAAGGAGGGCATGTTTCGGCAGAAGATGATGGGGAAGCGAGTGAATTTTGCTTGTCGTTCTGTGATATCACCAGATCCTTATCTCGCTGTCAATGAGATTGGGATCCCCCCTGTTTTTTCGTTAAAGTTAACATACCCTGAGAGAGTGACTCCTTGGAACGTGACAAGTTTAAGGGATGCCATTGTTAATGGCCCTGACATTCACCCTGGAGCTACACACTATGTTGATAAACAATCTACTATAAGATTGCCGGCAAACAAAAAATTGCGTATTTCTGCCTCGAGAAAGTTACCTTCTTCAAGAGGTGTTGCGACACAATCTGGGAAGAGTTTCAACTATGAATATGAAGGGAAAGTTGTACACCGTCATTTGCGCAATGGGGACATTGTGCTGGTCAATCGCCAGCCTACACTTCACAAACCAAGTATAATCGCACTTAAGGTTCGTGTCTTGCCTGGAGAGAAAACAATCCGCTTCCATTATGCAAACTGCGATTCCTTCAATGCTGATTTTGATGGGGATGAAATAAATGTTCATTTTCCACAAGACGACATATCACGAGCTGAAGCATACAACATTGTAAATGCTGATAATCAGTATATTGTTCCAACACGTGGTGATCCAAAAAGAGCCTTAATTCAGGATCACATTGTAAGCGCCGTACTCCTTACGAAGAGAGATACGTTTCTTACTTGGGATGAATTCAATGAGCTCCTTTATGCATCTGGTGTATGTTCCTTTGGTGCACCTTCTTTCAACGCTAAATCCGGCAAGAAATTATCTGTGGTGGATTCAGAAGATATCATTCTTGCCCATCCTCCAGCTATTATTAGACCACAGAGACTTTGGACTGGAAAGCAGGTCATAACTGCCATTCTAAATCACATAACCAGAGGGTGTTTGCCGTTTACTGTTAAGAAACGTGGTAAAATTGCCCGGGAGTATTTTGGGAAGGATGAATCTAAGAAGACCAATGCTGACTGTTCTAAGAAATTTGATAAAATTTCTGAAAAGAAATTGAAGAGGAATCAAGCCTCTAAGAAGACAGATGATAAGATTACAGAGAGGAGATTGCAGGGTAGTCCTGTTCACAGCATTGATGAAGATGTTGTACTTGTATACAAGAATGAACTTGTCCAAGGGGTAATTGACAAGGAGCAATTCGGCAAGTATGGTTTGGTTCACACTGTGCAGGAGATGTATGGGGCAAACGCTGCAGGAAGCTTACTTTCTGTCCTAAGTCGAGTATTGACTGCTTTTTTGCAGATGCATGGCTTTACTTGTGGAGTTGATGATCTTCTTCTAGCGCAACCATATGACAAGCAGAGAAAAGAACTGCTTGAAGTTTGCCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161919.p1 GENE.R_Transcript_161919~~R_Transcript_161919.p1 ORF type:3prime_partial len:868 (+),score=153.96,RNA_pol_Rpb1_2|PF00623.16|1e-57,RNA_pol_Rpb1_1|PF04997.8|1.1e-33,RNA_pol_Rpb1_1|PF04997.8|2.9e+03,RNA_pol_Rpb1_3|PF04983.14|8.6e-31 R_Transcript_161919:127-2727(+)
MAQTAELATETVEAVRFGIMTDEEVRKLSFRQITNPNILDTLGRPEHGGLYDPALGPLDDIQPCKSCGQRSLYCPGHCGHINLVSIVYHPLLFNMLYSLLQNTCFYCFHFRSEPAEVKLCLSKLNSIMKGDIVGARSLGINNSLLEGLGESKHVDPRDWTSFQLSEAFSVLNGFLKKKNKKCSICDQRNPAISKPTFGWIHMKGLSANDVKANLIKSCKLDGLVTNGDDDDDNAASDVENPTCENGGNADGSSAFSPTTRESKKQQMNRMKSEYLKQTKARDLLPSEVKRILEMLWKNEADICSFVCDIQQHHGYESKNNAGYLMFFLKTVLVPPTKFRPPSKGGESVMEHPQTVLLNNVLNANISLGNVYEHHAEHTNIIRSWRYLQQCINVLFDSKSAAGQRDVATGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPVFSLKLTYPERVTPWNVTSLRDAIVNGPDIHPGATHYVDKQSTIRLPANKKLRISASRKLPSSRGVATQSGKSFNYEYEGKVVHRHLRNGDIVLVNRQPTLHKPSIIALKVRVLPGEKTIRFHYANCDSFNADFDGDEINVHFPQDDISRAEAYNIVNADNQYIVPTRGDPKRALIQDHIVSAVLLTKRDTFLTWDEFNELLYASGVCSFGAPSFNAKSGKKLSVVDSEDIILAHPPAIIRPQRLWTGKQVITAILNHITRGCLPFTVKKRGKIAREYFGKDESKKTNADCSKKFDKISEKKLKRNQASKKTDDKITERRLQGSPVHSIDEDVVLVYKNELVQGVIDKEQFGKYGLVHTVQEMYGANAAGSLLSVLSRVLTAFLQMHGFTCGVDDLLLAQPYDKQRKELLEVCL

Click here to download the sequence:
Link to NCBI Protein BLAST