Transcript Information: R_Transcript_16194.p1


Annotated TAIR IDAT5G10490.1
Annotated Gene NameMSCS-like 2
Annotated Gene Symbol(s)MSL2
Annotation TypeOrtholog
Chromosome Positionchr5:3300376-3304005 | Reverse length=673
E-Value2.5E-244
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7760011963548
Replicate 25.2571381994725
Replicate 36.720717174908
Condition 2: 8 Hour
Replicate 16.6950598473266
Replicate 28.8275677929104
Replicate 38.1696189120943
Condition 3: 24 Hour
Replicate 15.8893299647106
Replicate 24.8108245199109
Replicate 35.7493049177564


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16194.p1 GENE.R_Transcript_16194~~R_Transcript_16194.p1 ORF type:complete len:651 (+),score=117.74,MS_channel|PF00924.14|5.6e-28 R_Transcript_16194:427-2379(+)
ATGGTGGTTGCTTCTTCCTTGCAACTATCCAATGAATTCAAAGTTTATAGTTGTTTGGGATTTGCCAACCAGCCAAAGTACACATTGCGGAATGGTCGACTTCAATTTGTAGACATGACATTTTCATCATCAGAGTTGCATCAGTTGAAGGATGCCTGGAATCTCCATCTCTCAAGTAAATCTATAAAGAAGAGAAATTCTGCCTCCGCGAGGCCTAAGGTTTTTCTCTGCAGATCCATTCTCTTACCAGGTGGAGGCAATACTTCGCCTTTAATGCAAAATGTTCCCGTCATATTGAAGAGGTTATACAACAATGTCTCTTCAAACTCTGTTGTACCTCAATTGGTCCCAGCCATTGGTGTAGTTGTTTTAGCTTGGGGACTTTTGCCACTCATGCGCCTTGGCTGGAATAATTTCCTTCATAAAAATGGCGGCAACTGGAAAAAAAGTAGCACATATTTTTTTGTGACCTCTTCTTATGTTCAACCATTTTTGCTCTGGAGTGGAGCATTGCTCATCTGCAGAGCATTGGATCCAGTCATTTTACCTTCGGAGGCAAGCCAGGCTGTTAAAGAGCGGCTTCTGCATTTTATACGATCATTTTCAACTGTACTTGCTTTTGCTTATTGCTTATCATGCTTCATTCAACAGACGCAAAAGTTCTTTATGGAATCAAGCGACTCTAGTGACACAAGAAATATGGGTTTTCAATTTGCTGGCAAGGCTATCTATACAGCTGTTTGGGTGGCATCAGTTTCACTGTTCATGGAATTGCTGGGGTTCTCTACCCAAAAATGGCTAACTGCTGGGGGTTTTGGGACAGTATTGCTCACACTTGCTGGTCGTGAGATATTCACGAACTTTCTGTCAAGTGTGATGATTCATGCAACACGGCCATTTGTGCTGAATGAATGGATTCAGACAAAAGTTGAAGGCTACGAAGTGTCCGGTACCATTGAGCATGTCGGTTGGTGGTCACCAACAATAATCAGAGGGGATGACCGTGAAGCGATTTATATTCCAAACCATAAGTTCACAGTTACTGTTGTCAGAAATCTGAGCCAGAAAACTCATTGGCGCATTAAGACCCATCTTGCTATTAGTCACTTGGATGTCAACAAGATTAATACCATTGTAGCTGACATGCGCAAAATTTTGGCTAAAAGTCCCCTTGTAGAGCAGCAGAGGTTGCATAGGAGAGTTTTCCTGGAGAACATCAACCCGGAGAACCAGGCACTAGTGATTCTGATATCCTGTTTTGTGAAAACCTCTCACTTCGAGGAGTACCTTTGTGTCAAGGAAGCGATACTCTTGGATCTTTTGAAGGTTATCAGCCATCATCGTGCCCGACTTGCCACTCCCATCCGGACTATTCGGAAAGTTTACACCGAGGCTAATGTTGAGAATGTCCCCTTTTCTGAAACTGCCTTCACTTCCAGGGCAGCCACTAACCATCCTTTCCTGCTGCTTGAACCTTCTTACAAGATAAATGGTGACAGTAGAAATAAACCTACAGCCCGTTCAGTAAATGCGAATGAAGAAAAGGACGAGAAGTCTGATGTGACTCTGAAATCTGACTCGAAGGTGGATGCCAAAACTGAAGATCAGGAGAAGGTAGATGTGAATGGAGTTTTGGAATCAGATCTTAATGAGGTGGGAAGCCCTTCAACAGCTCCAAGACGAGATGATGAAACCCCTACAACCTCACCAACAACTGCAAGGCCAGTCTTAGATGAAAATATTGTTCTCGGTGTTGCTCTAGAGGGCTCTAAGCGAACCCTTCCAATTGAGGAAGAAATGCCAGCATCACCTCCTACTGCAGAAGTAAAGGAACTAGCCGGTTCACGCAATGGAGTTAAATCTCCATCCAGTGCAGATGACAAGAAAGATGATCAGGTATCACCAACTGGTGGTGTAGTCCCAGGCGATAACCATGAAAAGCAAAGTGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16194.p1 GENE.R_Transcript_16194~~R_Transcript_16194.p1 ORF type:complete len:651 (+),score=117.74,MS_channel|PF00924.14|5.6e-28 R_Transcript_16194:427-2379(+)
MVVASSLQLSNEFKVYSCLGFANQPKYTLRNGRLQFVDMTFSSSELHQLKDAWNLHLSSKSIKKRNSASARPKVFLCRSILLPGGGNTSPLMQNVPVILKRLYNNVSSNSVVPQLVPAIGVVVLAWGLLPLMRLGWNNFLHKNGGNWKKSSTYFFVTSSYVQPFLLWSGALLICRALDPVILPSEASQAVKERLLHFIRSFSTVLAFAYCLSCFIQQTQKFFMESSDSSDTRNMGFQFAGKAIYTAVWVASVSLFMELLGFSTQKWLTAGGFGTVLLTLAGREIFTNFLSSVMIHATRPFVLNEWIQTKVEGYEVSGTIEHVGWWSPTIIRGDDREAIYIPNHKFTVTVVRNLSQKTHWRIKTHLAISHLDVNKINTIVADMRKILAKSPLVEQQRLHRRVFLENINPENQALVILISCFVKTSHFEEYLCVKEAILLDLLKVISHHRARLATPIRTIRKVYTEANVENVPFSETAFTSRAATNHPFLLLEPSYKINGDSRNKPTARSVNANEEKDEKSDVTLKSDSKVDAKTEDQEKVDVNGVLESDLNEVGSPSTAPRRDDETPTTSPTTARPVLDENIVLGVALEGSKRTLPIEEEMPASPPTAEVKELAGSRNGVKSPSSADDKKDDQVSPTGGVVPGDNHEKQSG*

Click here to download the sequence:
Link to NCBI Protein BLAST