Transcript Information: R_Transcript_161981.p1


Annotated TAIR IDAT3G52850.1
Annotated Gene Namevacuolar sorting receptor Homolog 1
Annotated Gene Symbol(s)VSR1, BP-80, ATELP, BP80, BP80B, ATELP1, ATVSR1, G
Annotation TypeOrtholog
Chromosome Positionchr3:19587999-19591690 | Forward length=623
E-Value2.7E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8754664517708
Replicate 20.86286166094376
Replicate 32.5103274077975
Condition 2: 8 Hour
Replicate 13.6896508824616
Replicate 21.8378806992755
Replicate 32.9838264033513
Condition 3: 24 Hour
Replicate 13.6166408646383
Replicate 22.2659512558812
Replicate 32.3986525684271


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_161981.p1 GENE.R_Transcript_161981~~R_Transcript_161981.p1 ORF type:5prime_partial len:146 (-),score=28.37 R_Transcript_161981:124-561(-)
GGTCATGGTCTGCGGGGAGATGTGACTATATTACCAACTCTAGTAGTTAACAACCGGCAGTATAGAGGCAAATTGGTGAAGAATGCTGTTCTCAAGGCAATCTGTTCAGGTTTTGAAGAGACAACTGAACCATCCCTCTGTTTGACCCCAGATATAGAAACAAATGAATGCCTGGAGAGCAATGGTGGATGCTGGGAGGATAAGGCTTCCAATCTGACTGCATGCAGGGATACATATCAAGGCAGAGTCTGTGAATGTCCTATAGTGCAAGGAGTCAAATTTGTTGGTGATGGTTATGTTCATTGTGAAGCTTCTGGGCTCTTGCACTGTAAAATTAACAATGGTGGATGTTGGAAGGATACTCGTGGTGACAGGACATATTCTGCTTGTGAAGTAAGTAATTCAGACATTCTGTTCAGCAGGGATTTATGCATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_161981.p1 GENE.R_Transcript_161981~~R_Transcript_161981.p1 ORF type:5prime_partial len:146 (-),score=28.37 R_Transcript_161981:124-561(-)
GHGLRGDVTILPTLVVNNRQYRGKLVKNAVLKAICSGFEETTEPSLCLTPDIETNECLESNGGCWEDKASNLTACRDTYQGRVCECPIVQGVKFVGDGYVHCEASGLLHCKINNGGCWKDTRGDRTYSACEVSNSDILFSRDLCI*

Click here to download the sequence:
Link to NCBI Protein BLAST