Transcript Information: R_Transcript_16199.p1


Annotated TAIR IDAT5G10490.1
Annotated Gene NameMSCS-like 2
Annotated Gene Symbol(s)MSL2
Annotation TypeHomolog
Chromosome Positionchr5:3300376-3304005 | Reverse length=673
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4920631812306
Replicate 21.9649917200695
Replicate 33.6126743869149
Condition 2: 8 Hour
Replicate 14.3285237861681
Replicate 25.6192857313205
Replicate 36.1029678688996
Condition 3: 24 Hour
Replicate 12.8647523750341
Replicate 22.0640970192221
Replicate 33.3381594669791


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16199.p1 GENE.R_Transcript_16199~~R_Transcript_16199.p1 ORF type:complete len:577 (+),score=91.61,MS_channel|PF00924.14|4.4e-28 R_Transcript_16199:427-2157(+)
ATGGTGGTTGCTTCTTCCTTGCAACTATCCAATGAATTCAAAGTTTATAGTTCTTTCGGATTTGCTAACCAGCCAAAGCATCAATTGAAGGATGCCTGGAATCTCCATCTCTCAAGTAAATCTATAAAGAAGAGAAATTCTGCCTCCGCGAGGCCTAAGGTTTTTCTCTGCAGATCCATTCTCTTACCAGGTGGAGGCAATACTTCGCCTTTAATGCAAAATGTTCCCGTCATATTGAAGAGGTTATACAACAATGTATCTTCAAACTCTCTTGTACCTCAATTGATCCCAGCCATTGGTGTAGTCGTTTTAGCTTGGGGACTTTTGCCACTCATGCGCCTTGGCTGGAATAATTTCCTTCATAAAAATGGTGGCAACTGGAAAAAAAGTAGCACTTATTTTTTTGTGACCTCTTATGTTCAACCATTGTTGCTCTGGAGTGGAGCATTGCTCATCTGCAGAGCATTGGATCCAGTCATTTTACCTTCGGAGGCAAGCCAGGCTGTTAAAGAGCGGCTTCTGCATTTTATACGATCATTTTCAACTGTACTTGCTTTTGCTTATTGCTTATCATGCTTCATTCAACAGACGCAAAAGTTCTTTATGGAATCAAGCGACTCTAGTGACACAAGAAATATGGGTTTTCAATTTGCTGGCAAGGCTATCTATACAGCTGTTTGGGTGGCATCAGTTTCACTGTTCATGGAATTGCTGGGGTTCTCTACCCAAAAATGGCTAACTGCTGGGGGTTTTGGGACAGTATTGCTCACACTTGCTGGTCGTGAGATATTCACGAACTTTCTGTCAAGTGTGATGATTCATGCAACACGGCCATTTGTGCTGAATGAATGGATTCAGACAAAAGTTGAAGGCTACGAAGTGTCCGGTACCATTGAGCATGTCGGTTGGTGGTCACCAACAATAATCAGAGGGGATGACCGTGAAGCGATTTATATTCCAAACCATAAGTTCACAGTTACTGTTGTCAGAAATCTGAGCCAGAAAACTCATTGGCGCATTAAGACCCATCTTGCTATTAGTCACTTGGATGTCAACAAGATTAATACCATTGTAGCTGACATGCGCAAAATTTTGGCTAAAAGTCCCCTTGTAGAGCAGCAGAGGTTGCATAGGAGAGTTTTCCTGGAGAACATCAACCCGGAGAACCAGGCACTAGTGATTCTGATATCCTGTTTTGTGAAAACCTCTCACTTCGAGGAGTACCTTTGTGTCAAGGAAGCGATACTCTTGGATCTTTTGAAGGTTATCAGCCATCATCGTGCCCGACTGGCCACTCCCATCCGGACTATTCGAAAAGTTTACTCTGAGGCTGATGTTGAGAATGTCCCCTTCTCTGAAACTGCCTTCACTAGTTCCAGGGCAGCCACTAACCATCCTTTCCTGCTGCTTGAACCTTCTTACAAGATAAATGGTGACAGTAGAAATAAACCTACAGCCCGTTCAGTAAATGCGAATGAAGAAAAGGACGAGAAGTCTGATATGACTCTGAAATCTGACTTGAAGTTGGATGCCAAAACTGATGATCAGGAGAAGGTAGATGTAAATGGAGTTTTGGAATCAGATCTTAATGAGGTGGGAAGCCCTTCAACAGCTCCAAGACGAGATGATGAAACCCCTACAACCTCACCAACAACTGCAAGGCCAGTCTTAGATGAAAATATTGTTCTCGGTGTTGCTCTAGATGGCTCTAAGCGAACCCCTTCCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16199.p1 GENE.R_Transcript_16199~~R_Transcript_16199.p1 ORF type:complete len:577 (+),score=91.61,MS_channel|PF00924.14|4.4e-28 R_Transcript_16199:427-2157(+)
MVVASSLQLSNEFKVYSSFGFANQPKHQLKDAWNLHLSSKSIKKRNSASARPKVFLCRSILLPGGGNTSPLMQNVPVILKRLYNNVSSNSLVPQLIPAIGVVVLAWGLLPLMRLGWNNFLHKNGGNWKKSSTYFFVTSYVQPLLLWSGALLICRALDPVILPSEASQAVKERLLHFIRSFSTVLAFAYCLSCFIQQTQKFFMESSDSSDTRNMGFQFAGKAIYTAVWVASVSLFMELLGFSTQKWLTAGGFGTVLLTLAGREIFTNFLSSVMIHATRPFVLNEWIQTKVEGYEVSGTIEHVGWWSPTIIRGDDREAIYIPNHKFTVTVVRNLSQKTHWRIKTHLAISHLDVNKINTIVADMRKILAKSPLVEQQRLHRRVFLENINPENQALVILISCFVKTSHFEEYLCVKEAILLDLLKVISHHRARLATPIRTIRKVYSEADVENVPFSETAFTSSRAATNHPFLLLEPSYKINGDSRNKPTARSVNANEEKDEKSDMTLKSDLKLDAKTDDQEKVDVNGVLESDLNEVGSPSTAPRRDDETPTTSPTTARPVLDENIVLGVALDGSKRTPSN*

Click here to download the sequence:
Link to NCBI Protein BLAST