Transcript Information: R_Transcript_162015.p1


Annotated TAIR IDAT3G18524.1
Annotated Gene NameMUTS Homolog 2
Annotated Gene Symbol(s)MSH2, ATMSH2
Annotation TypeOrtholog
Chromosome Positionchr3:6368151-6372409 | Reverse length=937
E-Value1.4E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31652533447489
Replicate 20.36409769508031
Replicate 30.79445332703419
Condition 2: 8 Hour
Replicate 10.42461037480772
Replicate 20.38776095678356
Replicate 30.41969041896849
Condition 3: 24 Hour
Replicate 10.26540817604282
Replicate 20.50994818244109
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162015.p1 GENE.R_Transcript_162015~~R_Transcript_162015.p1 ORF type:3prime_partial len:173 (+),score=57.88 R_Transcript_162015:185-700(+)
ATGTTTGAAACAATCGTACGAGATCTTCTTTTGGAAAGAACAGACCAAACAATTGAGTTGTATGAGGGTAGTGGTTCTAATTGGAGACTTGTGAAAAGCGGAAGTCCTGGAAATCTAGGCAGTTTTGAAAGTTTGTTGTTAGCCAATAATGAAATGAAGGATTCTCCAGGTACTGTTGCTCCTGTACAATCCAAGAACAGGCTTAATTTCCTGGGGCAGGGCCAAGGGAAGGAGGAGGAAAAGGAAGAGGATGACGAAGAAAAGGGTTGTGATGAGAATCAGAAGTTTGATAATTTTGAAGGAAATGACATTGGGCTGTTTGCTTCAGCCGAGTATGTTGTTGACAGAGAAGCTTGGATGAAGACAGCAGAAGCTGCTGAACGTACTCTGTATGTTGTTACTTGCCGGGTCATTATCAGCATGACTATTGATATTGGGGTTGAAGAACAGGATAGGGAGAGGACATGGGTTGCTGATGCTGAAGAGTGCAAGAAAAGAGGGGCTATTGAAACTGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162015.p1 GENE.R_Transcript_162015~~R_Transcript_162015.p1 ORF type:3prime_partial len:173 (+),score=57.88 R_Transcript_162015:185-700(+)
MFETIVRDLLLERTDQTIELYEGSGSNWRLVKSGSPGNLGSFESLLLANNEMKDSPGTVAPVQSKNRLNFLGQGQGKEEEKEEDDEEKGCDENQKFDNFEGNDIGLFASAEYVVDREAWMKTAEAAERTLYVVTCRVIISMTIDIGVEEQDRERTWVADAEECKKRGAIETA

Click here to download the sequence:
Link to NCBI Protein BLAST