Transcript Information: R_Transcript_162052.p1


Annotated TAIR IDAT5G28950.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10992505-10993435 | Forward length=148
E-Value6E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4519400759435
Replicate 20
Replicate 31.5618230179195
Condition 2: 8 Hour
Replicate 11.391242326548
Replicate 20.76230279004042
Replicate 31.031341512522
Condition 3: 24 Hour
Replicate 12.869725903463
Replicate 21.0025117677535
Replicate 31.9897913351725


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162052.p1 GENE.R_Transcript_162052~~R_Transcript_162052.p1 ORF type:complete len:88 (+),score=23.35,DDE_Tnp_4|PF13359.2|3e-05,DDE_Tnp_4|PF13359.2|1.3e+03 R_Transcript_162052:454-717(+)
ATGGCAATTTGTGACTTTGATATGTTGTTCACCTTTGTTCAAACTGGCTGGGAGGGTTCTGCTCATGACACACGCATTCTCACCGCTACGTTGGAAAAGTTTAAAGGCAAGGAGATATTTTCATATGCTCCTGAAGATGGTGAACATGAAGAAGAGGAAAGCAACAGAGATGATAGTTCATATGAGCATAGTGGAGCATTGGATGATCGTGATATGGCTACTGTTCGTAATACAATTGTTAAATCTTTAATGCATGGAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162052.p1 GENE.R_Transcript_162052~~R_Transcript_162052.p1 ORF type:complete len:88 (+),score=23.35,DDE_Tnp_4|PF13359.2|3e-05,DDE_Tnp_4|PF13359.2|1.3e+03 R_Transcript_162052:454-717(+)
MAICDFDMLFTFVQTGWEGSAHDTRILTATLEKFKGKEIFSYAPEDGEHEEEESNRDDSSYEHSGALDDRDMATVRNTIVKSLMHGK*

Click here to download the sequence:
Link to NCBI Protein BLAST