Transcript Information: R_Transcript_162055.p1


Annotated TAIR IDAT1G43722.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16496403-16497377 | Forward length=324
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0920574930174
Replicate 20.53836667734098
Replicate 30.78313632807359
Condition 2: 8 Hour
Replicate 10.41856179397
Replicate 21.3378305375068
Replicate 30.77570985557209
Condition 3: 24 Hour
Replicate 10.58866172378728
Replicate 20.754025944977
Replicate 30.74829759613324


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162055.p1 GENE.R_Transcript_162055~~R_Transcript_162055.p1 ORF type:complete len:117 (+),score=5.85 R_Transcript_162055:412-762(+)
ATGCTTAGAATGGAGACACAAGTATTTCTAAAATTGGCTCATTTATTAGTGACCAATTATGGTTTACAATCAACTAGGGCCATGCATGCACATGAGGCATTAGCTATGTTTTTATGGGTTTGTGCACATGGACACTCAAATCGTAATGTCCAATCTAGATTCAAACATTCGGGAGAAACTGCTAGTAGAAAATTTGATGAGGTTTTGAGGTCTATGGTTGCCTTTTCTAGAGATATTATACAACCATCTGCTGGACATTTTAGAGAAGTTCCAAGCAAGATACGTAAAATTTACAAATATTGGCCATATTTTAGAGGGTGTATTGGGACTATTGACGGTACCGTGCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162055.p1 GENE.R_Transcript_162055~~R_Transcript_162055.p1 ORF type:complete len:117 (+),score=5.85 R_Transcript_162055:412-762(+)
MLRMETQVFLKLAHLLVTNYGLQSTRAMHAHEALAMFLWVCAHGHSNRNVQSRFKHSGETASRKFDEVLRSMVAFSRDIIQPSAGHFREVPSKIRKIYKYWPYFRGCIGTIDGTVL*

Click here to download the sequence:
Link to NCBI Protein BLAST