Transcript Information: R_Transcript_162141.p1


Annotated TAIR IDAT3G16890.1
Annotated Gene Namepentatricopeptide (PPR) domain protein 40
Annotated Gene Symbol(s)PPR40
Annotation TypeHomolog
Chromosome Positionchr3:5768401-5770380 | Reverse length=659
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45255275094344
Replicate 20
Replicate 30.18931188095994
Condition 2: 8 Hour
Replicate 10.40472504045033
Replicate 20.36960135274687
Replicate 30.90007986547373
Condition 3: 24 Hour
Replicate 10.56920183209184
Replicate 20.18227486686427
Replicate 31.2662308496552


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162141.p1 GENE.R_Transcript_162141~~R_Transcript_162141.p1 ORF type:internal len:121 (+),score=13.56 R_Transcript_162141:2-361(+)
TCTCTTTCTCAAATTCTGCTTAGAAAGGACTGGCATTTGCTGCTTAATCACGAGTTAAAAGCTGGTAGGTTTGTTCTGAACCCGCAATCTGTAGTGAGTATTTTGCAAAACCAAGAAAACCCATTACATACTATTAGATTTTATATCTGGGTTTTGAATATTGAGCCATTGTATGCAAGGAATCAGCAAATCAGGGGTGTTCTTGCTAATACCCTTCATAGAAAAGGTCCGGTTTTGTTGTCTGTTGAATTGGTTAAGGATGTTAGGAGTTGTGGGTATGAGATTACTGAGGATTTCCTTTGCATTTTGTTTTGTTGTTGGGGTAGATTAGGACTAGCTAAGTATTGTGTTGAGATTTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162141.p1 GENE.R_Transcript_162141~~R_Transcript_162141.p1 ORF type:internal len:121 (+),score=13.56 R_Transcript_162141:2-361(+)
SLSQILLRKDWHLLLNHELKAGRFVLNPQSVVSILQNQENPLHTIRFYIWVLNIEPLYARNQQIRGVLANTLHRKGPVLLSVELVKDVRSCGYEITEDFLCILFCCWGRLGLAKYCVEIF

Click here to download the sequence:
Link to NCBI Protein BLAST