Transcript Information: R_Transcript_162170.p2


Annotated TAIR IDAT5G66440.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26530274-26531032 | Reverse length=252
E-Value8E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.51210488820239
Replicate 30
Condition 2: 8 Hour
Replicate 10.29860810911275
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.27997325887444
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162170.p2 GENE.R_Transcript_162170~~R_Transcript_162170.p2 ORF type:complete len:82 (+),score=7.55 R_Transcript_162170:221-466(+)
ATGAGAGATCACTCGCATAGTGACAAACAAAAGCAGCAGAGCTCAGCTGGTGGTAAAAAGCAACAAAAAAAAAAGAAAAAAGAAATTCTTTCGAAAAGTGAATTCATTCAGAGAGTTTTCTCTTTCCTAGGCCTGGCCGTGAAGAACGACAGCAAGCCGCTCTTCACGATGAAACCTTATCTGCTTAGCAATGAACGCTTCTATCGTTCTTTGAAACTCTTCGTTGCTCATATTCTCTTCCGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162170.p2 GENE.R_Transcript_162170~~R_Transcript_162170.p2 ORF type:complete len:82 (+),score=7.55 R_Transcript_162170:221-466(+)
MRDHSHSDKQKQQSSAGGKKQQKKKKKEILSKSEFIQRVFSFLGLAVKNDSKPLFTMKPYLLSNERFYRSLKLFVAHILFR*

Click here to download the sequence:
Link to NCBI Protein BLAST