Transcript Information: R_Transcript_162210.p1


Annotated TAIR IDAT3G46570.1
Annotated Gene NameGlycosyl hydrolase superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17145797-17146867 | Reverse length=356
E-Value5E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.79360699803125
Replicate 21.5448782915002
Replicate 30.99594511287619
Condition 2: 8 Hour
Replicate 10.49135514944305
Replicate 20.52349890598093
Replicate 30.72849273392857
Condition 3: 24 Hour
Replicate 12.6873687390289
Replicate 21.6965583761982
Replicate 32.562105899804


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162210.p1 GENE.R_Transcript_162210~~R_Transcript_162210.p1 ORF type:5prime_partial len:299 (+),score=5.30,Glyco_hydro_17|PF00332.14|3.2e-30 R_Transcript_162210:3-899(+)
AAAAAAAAAAAAAAAAAAAAAGCAGAGCATAAAAACCCCACAATCAAGTGTAAGAAGTCTCAACCCACAAAATTCCTATCAAACTGTGTCACGTGTAACTCAATCACCATACTACCGTCAAAGTCCTTCCCTAACGTGGCCTGCCCCCTGTTTTCCCCTCCCTATATTACCCTCACCCCTCCACTTCCCCCAAAAAAAGCTTCCACCTTTATTCTTCACTCCCCACTCTCCGGCATGTCGAACTCGAATCTCCCTTTCTTTCTCACATTCTTTCTCTTCCTTCTCAGCACCACCACTATCTCAGCCCAAATCGGCGTCAACTACGGCGGTTTCGGGGACAACCTCCCTCCACCCTTGGAAACCTCCAACTTCATCACCTCCCAAACCACCTTCACCCACCTCAAGCTCTACGACTCCAACCCCGACCTCCTCCAAGCATTCGCCAACACAGGCGTGTCCCTGACAATCTCAGTCCTCAACTCTGACATCATCTCCCTCACGAAACTCGAGGCCGCCCAATCATGGGTCTCCATCCACGTCATCCCTTTCCACCCTCAAACCATCACCCATTACATTGCTGTTGGTAATGAGGTTGACTACACTCGCGACAAAGTCCTCATGACTAACCTCCTGAAAGCCATGAACTTCATCCACAATGCTCTTGAACTAGCCAACTTATCCCACATCAAAGTCACCACCCCTCATTCCTTAGGCATCCTCTCTCCTCCCTCTGACCCACCCAGCACCGGTCGGTTCAGGTGTGGCTACGACTGGGTTCTTTTCGGTCCGATTCTAGACTTCCACAGTCGGACTGGGTCCCCTTTCATGGTTAACCCCCAATCCCTACTTCGGGTTATCTCCAAATACCCTCAACTACGCCCTCTTCAAGCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162210.p1 GENE.R_Transcript_162210~~R_Transcript_162210.p1 ORF type:5prime_partial len:299 (+),score=5.30,Glyco_hydro_17|PF00332.14|3.2e-30 R_Transcript_162210:3-899(+)
KKKKKKKAEHKNPTIKCKKSQPTKFLSNCVTCNSITILPSKSFPNVACPLFSPPYITLTPPLPPKKASTFILHSPLSGMSNSNLPFFLTFFLFLLSTTTISAQIGVNYGGFGDNLPPPLETSNFITSQTTFTHLKLYDSNPDLLQAFANTGVSLTISVLNSDIISLTKLEAAQSWVSIHVIPFHPQTITHYIAVGNEVDYTRDKVLMTNLLKAMNFIHNALELANLSHIKVTTPHSLGILSPPSDPPSTGRFRCGYDWVLFGPILDFHSRTGSPFMVNPQSLLRVISKYPQLRPLQAK*

Click here to download the sequence:
Link to NCBI Protein BLAST