Transcript Information: R_Transcript_162289.p1


Annotated TAIR IDAT3G42950.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:15015383-15017800 | Forward length=484
E-Value6.8E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5053988416263
Replicate 21.298740231936
Replicate 31.6530635378667
Condition 2: 8 Hour
Replicate 11.0097263895771
Replicate 20.46104911012754
Replicate 30.56139001918723
Condition 3: 24 Hour
Replicate 10
Replicate 20.90949521198257
Replicate 30.45129288014221


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162289.p1 GENE.R_Transcript_162289~~R_Transcript_162289.p1 ORF type:3prime_partial len:97 (+),score=1.69,Glyco_hydro_28|PF00295.13|1.1e-15 R_Transcript_162289:942-1229(+)
ATGTTCATCTTGAATAATTTTTGCAGTGCGGGTGTATCAATAGGAAGCGAGATGTCTGGTGGAGTCTCAAACGTCACAGTGGAGAATGTCCTGGTCTGGAGTTCCAGACGAGCTATCCGGATAAAAACTGCCCCAGGTAGGGGAGGATATGTTCAACACATAACCTATCGGAACCTCACATTTGAGACGGTCCGTGTTGGTATTATCATCAAGACGGATTACAATGAACACCCAGACGAGGGTTACGATCCCAAAGCCGTCCCAGCAATCGAGAACATAAGTTTCACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162289.p1 GENE.R_Transcript_162289~~R_Transcript_162289.p1 ORF type:3prime_partial len:97 (+),score=1.69,Glyco_hydro_28|PF00295.13|1.1e-15 R_Transcript_162289:942-1229(+)
MFILNNFCSAGVSIGSEMSGGVSNVTVENVLVWSSRRAIRIKTAPGRGGYVQHITYRNLTFETVRVGIIIKTDYNEHPDEGYDPKAVPAIENISFT

Click here to download the sequence:
Link to NCBI Protein BLAST