Transcript Information: R_Transcript_162290.p1


Annotated TAIR IDAT3G42950.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:15015383-15017800 | Forward length=484
E-Value5E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.37831171921258
Replicate 30.82546802148297
Condition 2: 8 Hour
Replicate 10.44118675580622
Replicate 20.80579754382651
Replicate 30
Condition 3: 24 Hour
Replicate 11.6546167371318
Replicate 20
Replicate 30.78874611484315


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162290.p1 GENE.R_Transcript_162290~~R_Transcript_162290.p1 ORF type:internal len:111 (+),score=1.26,Glyco_hydro_28|PF00295.13|1.5e-12 R_Transcript_162290:2-331(+)
GCGGTTGGGATCAGTACGGTATTGCTTATGGGAGGCCCTCCAAAAACATTCTCATCCGCAATCTTGTTGTTCGCTCTGAGGTTAGGAAGCGAGATGTCTGGTGGAGTCTCAAACGTCACAGTGGAGAATGTCCTGGTCTGGAGTTCCAGACGAGCTATCCGGATAAAAACTGCCCCAGGTAGGGGAGGATATGTTCAACACATAACCTATCGGAACCTCACATTTGAGACGGTCCGTGTTGGTATTATCATCAAGACGGATTACAATGAACACCCAGACGAGGGTTACGATCCCAAAGCCGTCCCAGCAATCGAGAACATAAGTTTCACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162290.p1 GENE.R_Transcript_162290~~R_Transcript_162290.p1 ORF type:internal len:111 (+),score=1.26,Glyco_hydro_28|PF00295.13|1.5e-12 R_Transcript_162290:2-331(+)
AVGISTVLLMGGPPKTFSSAILLFALRLGSEMSGGVSNVTVENVLVWSSRRAIRIKTAPGRGGYVQHITYRNLTFETVRVGIIIKTDYNEHPDEGYDPKAVPAIENISFT

Click here to download the sequence:
Link to NCBI Protein BLAST