Transcript Information: R_Transcript_162451.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value4E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.12655656130471
Condition 2: 8 Hour
Replicate 10
Replicate 20.12354078365296
Replicate 30.2005702830982
Condition 3: 24 Hour
Replicate 10.12683871396522
Replicate 20.12185225906396
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162451.p1 GENE.R_Transcript_162451~~R_Transcript_162451.p1 ORF type:3prime_partial len:181 (-),score=15.55,PPR_1|PF12854.3|6.4e-08,PPR_1|PF12854.3|1.5,PPR_2|PF13041.2|7.2e+03,PPR_2|PF13041.2|0.006,PPR_2|PF13041.2|2.9e-06 R_Transcript_162451:3-542(-)
ATGCGATTGCTTGAGTTCTCTTTGATGAATGTTTCAATTGTCGCATCCCATGCTGGTAACCATCTTCGCCTTCATTTTCCCAGTTCCTTTAATTATTTATTACTATGTCATTCTTTTCAATTTCATTCTTGCCGAAATTACTCAAATGGTAGAACTCAATTTTTATTGAAATTTGTGAGAAAGAAGTTCAATCTAGGGTTTAGAGACCTTGATTACCCCGTCTCTCTTTTCCATTGCATGATCTCTTTGCGTCCCCTCCCTTCCATCATTGATTTCAATCACCTCTTTTCCTCCATTCTCAAGACTAAGAGACCCAGAATTGAACTTGATAAATACCTCCTTGTTATTGCTCTCTCCAAACAGTTGGACTTTCTTAGTAATGGTAATGGTTTTGGTGTTCGTCCCGATTGCTATTCTTTTAGCATCCTGATCAATTGTTACTGCCGCTTGGGCCGCCTTGATTTGGGGTTTTCCCTTTTGGGTACTCTCTTCAAGCTTGGGTTTCAGCCTAATTCTTTCGTCTTCAATACCTTACTTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162451.p1 GENE.R_Transcript_162451~~R_Transcript_162451.p1 ORF type:3prime_partial len:181 (-),score=15.55,PPR_1|PF12854.3|6.4e-08,PPR_1|PF12854.3|1.5,PPR_2|PF13041.2|7.2e+03,PPR_2|PF13041.2|0.006,PPR_2|PF13041.2|2.9e-06 R_Transcript_162451:3-542(-)
MRLLEFSLMNVSIVASHAGNHLRLHFPSSFNYLLLCHSFQFHSCRNYSNGRTQFLLKFVRKKFNLGFRDLDYPVSLFHCMISLRPLPSIIDFNHLFSSILKTKRPRIELDKYLLVIALSKQLDFLSNGNGFGVRPDCYSFSILINCYCRLGRLDLGFSLLGTLFKLGFQPNSFVFNTLLD

Click here to download the sequence:
Link to NCBI Protein BLAST