Transcript Information: R_Transcript_162453.p1


Annotated TAIR IDAT1G63130.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23412854-23414746 | Forward length=630
E-Value7E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52907133202083
Replicate 20.060858841786371
Replicate 30.13279268171683
Condition 2: 8 Hour
Replicate 10.21292056475865
Replicate 20.25925660105722
Replicate 30.73658709763889
Condition 3: 24 Hour
Replicate 10.73198805653549
Replicate 20.25571314655742
Replicate 30.50754097824689


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162453.p1 GENE.R_Transcript_162453~~R_Transcript_162453.p1 ORF type:3prime_partial len:345 (-),score=45.53,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|8.7e-06,PPR_2|PF13041.2|3.8e-08,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|1.1e-13,PPR_1|PF12854.3|1.1e-07,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|8.1e-11,PPR_1|PF12854.3|5.5e-06,PPR_1|PF12854.3|2.2e-09,PPR_1|PF12854.3|0.73,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|9.6e-05,PPR|PF01535.16|2.4,PPR|PF01535.16|0.0062,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|5e-05,PPR|PF01535.16|2.8e-08,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|0.042,PPR_3|PF13812.2|15,PPR_3|PF13812.2|5.8,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|2.6e-05 R_Transcript_162453:2-1033(-)
ATGAATGCTTCAATTGTCGCCTCCCATGCTGGTAACCATCTTCGCCTTCATTTTCCCAGTTCCTTTAATTATTTATTACTATGTCATTCTTTTCAATTTCATTCTTGCCGAAATTACTCAAATGGTAGAACTCAATTTTTATTGAAATTTGTGAGAAAGAAGTTCAATCTAGGGTTTAGAGACCTTGATTACCCCGTCTCTCTTTTCCATTGCATGATCTCTTTGCGTCCCCTCCCTTCCATCATTGATTTCAATCACCTCTTTTCCTCCATTCTCAAGACTAAGAGACCCAGAATTGAACTTGATAAATACCTCCTTGTTATTGCTCTCTCCAAACAGTTGGACTTTCTTAGTAATGGTAATGGTTTTGGTGTTCGTCCCGATTGCTATTCTTTTAGCATCCTGATCAATTGTTACTGCCGCTTGGGTCGAGTTGATTTGGGCTTCTCTCTTTTGGGTACTCTTATTAAGCTTGGGTTTGAACTTGATCGTGTTGTCTTCACTACCTTGCTTGATGCCTTCATTCATTGTAATCAGCTGCCACAAGCTCTCTCCTTTTTGGATACCCTTCTTATTCAAGGCTTCCGACCTGACCTTGTCACTTATGGTGCTTTGTTTAAAGGCTTTTGTCAAGTTGGTAACAATGTTGGCGCTCTCTCCTTGCTTACCAAGATTGAATCTTCTGGCCTTTGTGAGCCCAACATTGTCATCTATTCCACCCTAATTGACAGCCTGTGCAACGAAAAGAAGTTAAATGAGGCCTTGAACCTCTTCTCGAAAATGCAAAACAAGGGCATCTCACCTGATGTTGTCCCCTACACCTCCTTACTCCGTGGTCTTTGTAGTTTAGGCCGTTGGGATGAGTCTAAGGCTACATTTGCTGACATGGTAGAGAGCAATGTAGCACCAAATGTCCAAACTTATAGCATGCTGATTGACATGTATTGCAAATGCGGGAAAGTTGAGCAAGCAAAGTCCATACTTGAATTGATGATTGAGAGGGGTGTGTCGCCTAACATTGTTACCTACAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162453.p1 GENE.R_Transcript_162453~~R_Transcript_162453.p1 ORF type:3prime_partial len:345 (-),score=45.53,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|8.7e-06,PPR_2|PF13041.2|3.8e-08,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|1.1e-13,PPR_1|PF12854.3|1.1e-07,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|8.1e-11,PPR_1|PF12854.3|5.5e-06,PPR_1|PF12854.3|2.2e-09,PPR_1|PF12854.3|0.73,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|9.6e-05,PPR|PF01535.16|2.4,PPR|PF01535.16|0.0062,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|5e-05,PPR|PF01535.16|2.8e-08,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|0.042,PPR_3|PF13812.2|15,PPR_3|PF13812.2|5.8,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|2.6e-05 R_Transcript_162453:2-1033(-)
MNASIVASHAGNHLRLHFPSSFNYLLLCHSFQFHSCRNYSNGRTQFLLKFVRKKFNLGFRDLDYPVSLFHCMISLRPLPSIIDFNHLFSSILKTKRPRIELDKYLLVIALSKQLDFLSNGNGFGVRPDCYSFSILINCYCRLGRVDLGFSLLGTLIKLGFELDRVVFTTLLDAFIHCNQLPQALSFLDTLLIQGFRPDLVTYGALFKGFCQVGNNVGALSLLTKIESSGLCEPNIVIYSTLIDSLCNEKKLNEALNLFSKMQNKGISPDVVPYTSLLRGLCSLGRWDESKATFADMVESNVAPNVQTYSMLIDMYCKCGKVEQAKSILELMIERGVSPNIVTYN

Click here to download the sequence:
Link to NCBI Protein BLAST