Transcript Information: R_Transcript_162455.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value3E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13323329164028
Replicate 20
Replicate 30.16720246420549
Condition 2: 8 Hour
Replicate 10
Replicate 20.16321811562909
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.32197458234419
Replicate 30.15976426778757


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162455.p1 GENE.R_Transcript_162455~~R_Transcript_162455.p1 ORF type:complete len:137 (-),score=19.90,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|3.6e-19,PPR_2|PF13041.2|5e-17,PPR_2|PF13041.2|1e-15,PPR_1|PF12854.3|5.5e-10,PPR_1|PF12854.3|7.1e-11,PPR_1|PF12854.3|5.3e-15,PPR_1|PF12854.3|0.08,PPR|PF01535.16|6.9e-09,PPR|PF01535.16|2.4e-08,PPR|PF01535.16|9.2e-11,PPR|PF01535.16|1.3e+04,PPR_3|PF13812.2|6.2e-06,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|3.3e-06 R_Transcript_162455:307-717(-)
ATGAGGCTAAGGCTACATTTGCTGATAATGTTGGAGAGCAATGTAGCACCAAATGTCCAAACTTATAGCATGCTGATTGACATGTATTGCAAATGCGGGAAAGTTGAGCAAGCAAAGTCCATACTTGAATTGATGATTGAGAGGGGTGTGTCGCCTAACATTGTTACCTACAATTCTCTTTTGGATGGATATTGTTCGGGATGTCAAATGGATGAAGCATCAGAGCTAATAGATTTGATGAAAAATATTGGATGCCAACCTGATCTTGTCAGTTGCAATACCATGATCAATGGGTATTGCAGGAGTAATAACCTCGACAAAGCTTTCAGCCTCCTCAAGGAAATGCCTGCTAAAGGATTGAGCCCTGATATATTTACATATAACACTCATAGCTGGCTTGTGCAAGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162455.p1 GENE.R_Transcript_162455~~R_Transcript_162455.p1 ORF type:complete len:137 (-),score=19.90,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|3.6e-19,PPR_2|PF13041.2|5e-17,PPR_2|PF13041.2|1e-15,PPR_1|PF12854.3|5.5e-10,PPR_1|PF12854.3|7.1e-11,PPR_1|PF12854.3|5.3e-15,PPR_1|PF12854.3|0.08,PPR|PF01535.16|6.9e-09,PPR|PF01535.16|2.4e-08,PPR|PF01535.16|9.2e-11,PPR|PF01535.16|1.3e+04,PPR_3|PF13812.2|6.2e-06,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|3.3e-06 R_Transcript_162455:307-717(-)
MRLRLHLLIMLESNVAPNVQTYSMLIDMYCKCGKVEQAKSILELMIERGVSPNIVTYNSLLDGYCSGCQMDEASELIDLMKNIGCQPDLVSCNTMINGYCRSNNLDKAFSLLKEMPAKGLSPDIFTYNTHSWLVQE*

Click here to download the sequence:
Link to NCBI Protein BLAST