Transcript Information: R_Transcript_162519.p2


Annotated TAIR IDAT5G08510.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2753099-2754731 | Forward length=511
E-Value2.5E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64530670041935
Replicate 20.84833537035548
Replicate 30
Condition 2: 8 Hour
Replicate 10.74199590749228
Replicate 21.2422712133992
Replicate 30.73339840890452
Condition 3: 24 Hour
Replicate 10
Replicate 20.89112157133646
Replicate 31.2159835937165


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162519.p2 GENE.R_Transcript_162519~~R_Transcript_162519.p2 ORF type:complete len:198 (+),score=46.77,PPR|PF01535.16|3.7,PPR|PF01535.16|0.014,PPR|PF01535.16|1.4,PPR|PF01535.16|7.8,PPR|PF01535.16|6.9e+03,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|7.1,PPR_2|PF13041.2|2e+02,PPR_3|PF13812.2|15,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|6.7e+02,PPR_3|PF13812.2|4.7 R_Transcript_162519:1151-1744(+)
ATGTTGCCTGATGATGTCACACTTGTTGCGGCTCTTGTTGCTTGCACACATGGTGGCATGATTACACAAGGATGGGAATTATTTGAATCAATGAAGAGCAAATTCAGTATCGCTCCCAAGCTAGAACACTATGGTTGTATGGTCGATCTCCTTGGGCGTGCAGGGAAGCTCAAAGAAGCTCATAATCTTATACAAAATATGTCAATTGAGCCTGATTCTGTGATATGGGGTACCCTTTTGGGGGCTTGCAGTTTCCATGGCAATGTTGAAGTTGCAGAAAAGGCAGCAGAGGCCCTTTTCGGGCTTGAGCCATGGAATCCTGGGAACTATGTAATTCTTTCTAATATATATGCTTCTGCTAAGAGATGGGATGGAGTTGCAAAGCTGAGAAAGACGATGAAGAGCAGCCAAATCACGAAAGGAGCTGGTTGTAGTTTTGTGGAAGACTCTGGTCAAGTTCATAAATTCATTGTAGAGGATAAATCACATCCAAGAACCAATGAGATCTATAAAGTCCTCGACAATGTGTATACCATGATGGAGAAGGTCGATGATGAAAACATTATGGATTTTGAATTTGTTCCTTTTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162519.p2 GENE.R_Transcript_162519~~R_Transcript_162519.p2 ORF type:complete len:198 (+),score=46.77,PPR|PF01535.16|3.7,PPR|PF01535.16|0.014,PPR|PF01535.16|1.4,PPR|PF01535.16|7.8,PPR|PF01535.16|6.9e+03,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|7.1,PPR_2|PF13041.2|2e+02,PPR_3|PF13812.2|15,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|6.7e+02,PPR_3|PF13812.2|4.7 R_Transcript_162519:1151-1744(+)
MLPDDVTLVAALVACTHGGMITQGWELFESMKSKFSIAPKLEHYGCMVDLLGRAGKLKEAHNLIQNMSIEPDSVIWGTLLGACSFHGNVEVAEKAAEALFGLEPWNPGNYVILSNIYASAKRWDGVAKLRKTMKSSQITKGAGCSFVEDSGQVHKFIVEDKSHPRTNEIYKVLDNVYTMMEKVDDENIMDFEFVPFT*

Click here to download the sequence:
Link to NCBI Protein BLAST