Transcript Information: R_Transcript_162526.p1


Annotated TAIR IDAT1G12310.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4187500-4187946 | Reverse length=148
E-Value3.9E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1252.21497917338
Replicate 2234.00082473304
Replicate 3255.07829762445
Condition 2: 8 Hour
Replicate 1172.54525392732
Replicate 2179.20052503567
Replicate 3186.01159855378
Condition 3: 24 Hour
Replicate 1208.22945714474
Replicate 2226.73630635173
Replicate 3209.16054245189


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162526.p1 GENE.R_Transcript_162526~~R_Transcript_162526.p1 ORF type:5prime_partial len:214 (+),score=42.45,EF-hand_7|PF13499.2|0.00013,EF-hand_7|PF13499.2|1.2e-09,EF-hand_6|PF13405.2|4.1e-07,EF-hand_6|PF13405.2|7.3e-05,EF-hand_6|PF13405.2|2.7e+03,EF-hand_1|PF00036.28|3.5e-06,EF-hand_1|PF00036.28|0.0042,EF-hand_1|PF00036.28|3.3,EF-hand_8|PF13833.2|0.018,EF-hand_8|PF13833.2|2.4e+03,EF-hand_8|PF13833.2|3e-05,EF-hand_9|PF14658.2|0.21,EF-hand_9|PF14658.2|0.0061,EF-hand_5|PF13202.2|0.0032,EF-hand_5|PF13202.2|13,EF-hand_5|PF13202.2|3e+03 R_Transcript_162526:3-644(+)
CACATTCCACTCAAACCTCAAAAGACGCATGGTTTCCATCCATTTTTAGATTTTTCAGACCTTGACACTCGCCTTTCTAGGGACTCCCAACATCAAAACCACCGTCCCCCTTTCACTTGTCCTTTCAACAGCAACAGCAAAACATTCCTTCCTTCTTCACTCTCCACTCCCAGAAATTCCAACTCAACAACAAAAAAAATGGGGAAAGACTTGAGCGATGATCAAGTGAGTTCAATGAAAGAAGCTTTCACACTCTTTGACACAGACAACGATGGCAAAATCGCACCATCAGAATTGGGGATTCTCATGAGATCATTAGGAGGAAACCCTACACAAGCCCAGTTGAAAGAAATCATAGCCCAAGAGAACCTAAATGCACCCTTTGATTTCAACAGGTTTCTAGATCTGATGGCAAAACACTTAAAGCCTGAGCCTTTTGACAGGCAACTAAGGGATGCCTTTAAAGTACTTGATAAAGAGGGAACTGGGTTCGTTGCTGTTTCGGATCTGAGGCATATTTTGACTAGCATTGGTGAAAAGCTTGAGCCTGCTGAATTTGATGAGTGGATCCGTGAAGTTGAGGTTGGATCTGATGGGAGGATCAAGTATGAAGATTTCATTGCTAGGATGGTCGCTAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162526.p1 GENE.R_Transcript_162526~~R_Transcript_162526.p1 ORF type:5prime_partial len:214 (+),score=42.45,EF-hand_7|PF13499.2|0.00013,EF-hand_7|PF13499.2|1.2e-09,EF-hand_6|PF13405.2|4.1e-07,EF-hand_6|PF13405.2|7.3e-05,EF-hand_6|PF13405.2|2.7e+03,EF-hand_1|PF00036.28|3.5e-06,EF-hand_1|PF00036.28|0.0042,EF-hand_1|PF00036.28|3.3,EF-hand_8|PF13833.2|0.018,EF-hand_8|PF13833.2|2.4e+03,EF-hand_8|PF13833.2|3e-05,EF-hand_9|PF14658.2|0.21,EF-hand_9|PF14658.2|0.0061,EF-hand_5|PF13202.2|0.0032,EF-hand_5|PF13202.2|13,EF-hand_5|PF13202.2|3e+03 R_Transcript_162526:3-644(+)
HIPLKPQKTHGFHPFLDFSDLDTRLSRDSQHQNHRPPFTCPFNSNSKTFLPSSLSTPRNSNSTTKKMGKDLSDDQVSSMKEAFTLFDTDNDGKIAPSELGILMRSLGGNPTQAQLKEIIAQENLNAPFDFNRFLDLMAKHLKPEPFDRQLRDAFKVLDKEGTGFVAVSDLRHILTSIGEKLEPAEFDEWIREVEVGSDGRIKYEDFIARMVAK*

Click here to download the sequence:
Link to NCBI Protein BLAST