Transcript Information: R_Transcript_162614.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52063814803728
Replicate 20.21137215184193
Replicate 30.19217061741739
Condition 2: 8 Hour
Replicate 10.61625499028302
Replicate 20.26262780685956
Replicate 30.42638011524399
Condition 3: 24 Hour
Replicate 10.42371791863212
Replicate 20.33304921143489
Replicate 30.55086505084473


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162614.p1 GENE.R_Transcript_162614~~R_Transcript_162614.p1 ORF type:5prime_partial len:596 (+),score=49.27,RVT_1|PF00078.23|5.9e-24,RVT_1|PF00078.23|2e+03 R_Transcript_162614:1-1788(+)
GTGGCCAGACACCACACAGTCGAGTTCTTGGTGATTGAAACCCCTCTAGCCTACAATGCCATCTTAGGTCGGCCAACTCTGAACGCCCTCAAGGCCGTCGTAGCAACTCATATGCTACTCATGCAGTACGAGTCAGACGATGGAAAAGTGGGCAAGCTGTATGGCGACCAACGAACAGGCAGAGAATGTTATTTTGCTGACCTGAAAGGGTGGACGGCCAAGCCTGAGCTCGGCTCTAAAAGAAAGGTGGATGAACTCGGCCCTCAAATCATGATGATGGAGCACCTGGATGCTCGGCTCGATAATGAACCCCATCCAGAACCAATGGATGAGACCGAGGATATCCCATTGGACACAACTCGTCCCGAGAGGACGGTCACCATGGGAAAAATGAAGACACCTCTAGCGGAGCTCACCAGGGAGGTATTACGGGAATATGCCGATGTCTTCGCCTACTCGGTCGAAGAAATGCCAGGCATTGATCCTTCTGTGGCTGAACACAAGCTCAACATCAGGGCTGGTATAGCCCATGTCCAGCAAAAAAAGAGGAACATGGGCCCGGAGAGATCCCAGGCAGCAAATGAGGAGGTAAGCAAGTTGTTGGAGGCCGGTTTTATCAGGGAATGTCAATACCCAGGGTGGTTATCCAACGTGGTCATGGTTCGAAAGCCAAACGGATCTTGGAGGATGTGTGTAGATTTCACCGACCTAAACAAGGCCTGCCCTAAGGATCATCACCCGCTACCTCGGATAGACAGATTGGTGGATTCAACAGCGAGTCATGCCATGCTTAGTTTTCTCGATGCCTTCTCGGGGTACCATCAGATCCCCCTACAACGAGAAGACCAGGAGAACACCGCCTTCATTGTGGACAGAGGAGTATACTGCTACCGAGTCATGCCATTCAGGTTAAAGAATGCAGGAGCCACCTATCAAAGGATGGTAGACCGGTTGTTTGAAGGGCAGATCGGCCGCAATATGGAGGTTTACGTAGACGATATGATTGTCAAAAGCAAGACAGTGGAGCAACACCCTGCCGACCTAAGGGAAACTTTTGAGTGCCTCAGGAGGCACAAAATGAAACTCAACCCTAAGAAGTTTACCTTCGGCGTGTCCTCGGGTAAATTCCTCGGTTTCCTGATCAGCCGAAGGGGAATTGACGTAAACCCCGACAAGGTACAGGCAATAGCTGATATGAAGCCCCCGAGATCGATAAAAGAAGTTCAGAAGCTGGCCGGATGCGTGGCTGCCCTGAGGCGGTTCATGTCCAAGTCCGCTGAGAAATGTATGCCGTTCTTTGATGTCTTGAAGAAGAAGGCCAAGTTTGAATGGACTCAGGATGCACAGCGATCCTTTGAAAAGTTAAAAGAACACCTATCCTCTCTCCCGAGGATGGTAAGCCCGGAGGTCGGCGAACCACTCTACCTTTACCTCTCAGTATCCAAGGTGGCTGTAAGCTCGATCCTGGTAGCCGAGCGGGACAGCGAAAAAAAGCCAGTTTACTTCATCAGCCATGCATTATGCGGCCCACAATTGCGTTACTCGGAGCTAGAGAAGTTTGCTCTAGCCCTGCTACTTACCCATCGCAAGTTGTACCCCTACTTCCAATCTAATCAGGTGATTGTGCTAACAAATCAACCACTGAAGAAAGTAATGGAGAAGTTGGACTGTGCAGGGAGGATGCAAGTGTGGGCAGCAGAGATGTCGGGCCTGGGTTGCCCGCAATATCAACCTAGACGGGCAATCAAAGCTCAAGCCCTGGCTGACTTCAGAATGTACTCGGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162614.p1 GENE.R_Transcript_162614~~R_Transcript_162614.p1 ORF type:5prime_partial len:596 (+),score=49.27,RVT_1|PF00078.23|5.9e-24,RVT_1|PF00078.23|2e+03 R_Transcript_162614:1-1788(+)
VARHHTVEFLVIETPLAYNAILGRPTLNALKAVVATHMLLMQYESDDGKVGKLYGDQRTGRECYFADLKGWTAKPELGSKRKVDELGPQIMMMEHLDARLDNEPHPEPMDETEDIPLDTTRPERTVTMGKMKTPLAELTREVLREYADVFAYSVEEMPGIDPSVAEHKLNIRAGIAHVQQKKRNMGPERSQAANEEVSKLLEAGFIRECQYPGWLSNVVMVRKPNGSWRMCVDFTDLNKACPKDHHPLPRIDRLVDSTASHAMLSFLDAFSGYHQIPLQREDQENTAFIVDRGVYCYRVMPFRLKNAGATYQRMVDRLFEGQIGRNMEVYVDDMIVKSKTVEQHPADLRETFECLRRHKMKLNPKKFTFGVSSGKFLGFLISRRGIDVNPDKVQAIADMKPPRSIKEVQKLAGCVAALRRFMSKSAEKCMPFFDVLKKKAKFEWTQDAQRSFEKLKEHLSSLPRMVSPEVGEPLYLYLSVSKVAVSSILVAERDSEKKPVYFISHALCGPQLRYSELEKFALALLLTHRKLYPYFQSNQVIVLTNQPLKKVMEKLDCAGRMQVWAAEMSGLGCPQYQPRRAIKAQALADFRMYSG*

Click here to download the sequence:
Link to NCBI Protein BLAST