Transcript Information: R_Transcript_162631.p1


Annotated TAIR IDAT2G03380.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:1028292-1030361 | Forward length=689
E-Value1.6E-265
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.83659404375794
Replicate 20.3790998686276
Replicate 30.69992809321577
Condition 2: 8 Hour
Replicate 10.64615476944119
Replicate 20.52796526569466
Replicate 30.88236996071326
Condition 3: 24 Hour
Replicate 11.2754337348725
Replicate 20.82707220839665
Replicate 31.4591803124598


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162631.p1 GENE.R_Transcript_162631~~R_Transcript_162631.p1 ORF type:complete len:720 (+),score=142.05,PPR|PF01535.16|51,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|6.2,PPR|PF01535.16|0.00049,PPR|PF01535.16|6.4e-07,PPR|PF01535.16|6,PPR|PF01535.16|0.13,PPR|PF01535.16|0.00022,PPR|PF01535.16|0.071,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.0029,PPR|PF01535.16|8.5e-08,PPR|PF01535.16|0.089,PPR|PF01535.16|0.0086,PPR|PF01535.16|0.83,PPR_2|PF13041.2|27,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|5.7,PPR_2|PF13041.2|1.7e-06,PPR_2|PF13041.2|12,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|7.1e-11,PPR_2|PF13041.2|0.001,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|1.4,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|65,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|0.0075,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|26,PPR_1|PF12854.3|1.2e+04,PPR_1|PF12854.3|8.8e+03,PPR_1|PF12854.3|3.7e+02,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|5.6e+03,PPR_1|PF12854.3|64,PPR_1|PF12854.3|0.29,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|4.5e-05,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|0.34,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|22,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|6.6e+02 R_Transcript_162631:135-2294(+)
ATGAATCGACTAGTATTTTCTCATGTAATCAAGCAAAAAATCCCTAACTTTCCCAAATGCCCACTCCAAACGAGGGCTCTTTCTTTACTTTATTCTCTCCCCTATCAAAAACCATTTGCATCAGACACCATTGAAGCAACCCAACAAACCTTAGCTTCAATTCGTTCTATCTCTTCAAACCCATGTTACTCTCTTCTTACTATCTGTAAAAATCTAACCTTTCTGAAAAAAGCTCATGCGTTACTCATTGTTCATGGCCTCTCTAATGACCTTCTATGCCTCACAAAACTCATGAGTTTGTATGGTTCTTTTGGTCATGTGAGTTTTGCTCGCATGGTTTTTGATAGAATCCCAAACCCAGATCTTTATTCCTTCAAAGTTATGATTAGGTGGTACTTTTTGAATGAATTGCACTCTGATACAATTTTGTTCTACAACTGTTTGAGGAAATGCCTCAGAGAGAATGACGATATTGTTTTCTCTATTGTGTTGAAAGCTTGTTGTGAATTGAGGGATATTGATGAGGGGAGAAAAGTTCATTGCCATATTTTCAAGGCTGGGCGTCCTGATAGTTTTGTCATGACTAGTTTGGTTGATGTATATGCTAAGTGTGGGGATATGGAGAGTGCCCGGTGTGTGTTTGATGAAATTGAGGATAGAAATGTGGTTTCTTGGACATCTTTGATTGCTGGATATGTTCAGAATGACTGTTCTGAAGAGGGTTTGAGTTTGTTTAACAAGATGAGGGAAAGTCTTGTTGATGGTAATCAGTTCACTTTGGGGACCTTAGTGGCTGGTTGTGGAAAGTTGGGAGCTTTGCATCAAGGGAAATGGATTCATGGGTATATGATTAAGGCTGGTATTGAATTGAGCTCTTTCTTGGAAACTGCTCTTCTAGATATGTATGTCAAATGTGGAAGCATCGAAGATGCACGGTCTGTGTTTGACAAGTCATCTATGATTGATGTTGTGACTTGGACTGCTATGATTGTTGGTTATACTCAAAGTGGTCAGCCAGTTGAGGCCTTGAAGTTGTATACCAACAAGAGATGGGCTGGTATTTGGCCTAATTCCATGACCATAGCTAGTGTGCTTTCGGCTTGTGCTCAGCTCCAAGATTTATGTGTGGGGCGGTCAGTTCACTGCCTTGCAACTGTGCATGGTTTAGACGATGCTGCTGTCAAACATGCTCTCATTGACATGTATGCAAAATGCCGCATGATTGGAGAGTCTCGGTATATATTTGAGTCGATGAAGGACAAGGATGTTATTGCTTGGAATTCGATAATTTCGGGGTATTTTCAGAATGGATGTGCTCTTGAAGCCCTCCGACTCTTTCATCAGATGAGACTCGAGTCACTATCTCCAGATGCAGTCACGTTGGTCAGTGTCATCTCTGCGTGTGCTTCCATCAGTGCCATAGCAGTTGGCTCTTCTGTGCACGCTTATTTTATCAAGGAAGGATTGTCATCTGTTAATACATATGTAGGCACTGCTCTTCTGAATTTCTATGCCAAATGTGGTGAAGCTTTATCTGCCCGTGAAGTTTTTGATGAGATGAAAGATAAGAATGCAGTAACATGGAGTTCAATGATTAGGGGATATGGAATGCATGGTGATGGTGATGAGTCGTTTGCATTATTCAACGATATGTTGCAGGAGAATGTGGAGCCCAATGAAGTTATCTTCACAGCTGTTTTATCTGCCTGCAGCCACACAGGAAAGGTTGGGGAAGGGTGGAAATACTTCACTTCTATGTGTCGGGAGTATAATTTCGTGCCCACCATGAAGCATTATGCATGTATGGTGGATATATTGGCTCGTGCAGGAAAGCTGGAGGAAGCGGTAGACTTTATGGAGAAAATGCCCATTCAGCCAGATATTACAGTGTTAGGGGCATTTGTTCATGGATGTAGCCTCCATTCAAAGTTCGACCTGGGAGAAATTGCAGCAAGGAGAATGTTAAAAATGCATCCTAATGAAGCTTGTTACTATGTGCTTCTTTATAAGCTATATGCTTCAGATGGAAGGTGGGATAAGGCAAATGAGATCAGAAATTTAATGAAGGAAAGAAGGTTAAGCAAGTCCCCTGGTTGGAGCTTCACAGAGATGGATGCTTGTGATCAGTTCCCTTCCTTTCCAGCTTCTTCCACTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162631.p1 GENE.R_Transcript_162631~~R_Transcript_162631.p1 ORF type:complete len:720 (+),score=142.05,PPR|PF01535.16|51,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|6.2,PPR|PF01535.16|0.00049,PPR|PF01535.16|6.4e-07,PPR|PF01535.16|6,PPR|PF01535.16|0.13,PPR|PF01535.16|0.00022,PPR|PF01535.16|0.071,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.0029,PPR|PF01535.16|8.5e-08,PPR|PF01535.16|0.089,PPR|PF01535.16|0.0086,PPR|PF01535.16|0.83,PPR_2|PF13041.2|27,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|5.7,PPR_2|PF13041.2|1.7e-06,PPR_2|PF13041.2|12,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|7.1e-11,PPR_2|PF13041.2|0.001,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|1.4,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|65,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|0.0075,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|26,PPR_1|PF12854.3|1.2e+04,PPR_1|PF12854.3|8.8e+03,PPR_1|PF12854.3|3.7e+02,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|5.6e+03,PPR_1|PF12854.3|64,PPR_1|PF12854.3|0.29,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|4.5e-05,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|0.34,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|22,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|6.6e+02 R_Transcript_162631:135-2294(+)
MNRLVFSHVIKQKIPNFPKCPLQTRALSLLYSLPYQKPFASDTIEATQQTLASIRSISSNPCYSLLTICKNLTFLKKAHALLIVHGLSNDLLCLTKLMSLYGSFGHVSFARMVFDRIPNPDLYSFKVMIRWYFLNELHSDTILFYNCLRKCLRENDDIVFSIVLKACCELRDIDEGRKVHCHIFKAGRPDSFVMTSLVDVYAKCGDMESARCVFDEIEDRNVVSWTSLIAGYVQNDCSEEGLSLFNKMRESLVDGNQFTLGTLVAGCGKLGALHQGKWIHGYMIKAGIELSSFLETALLDMYVKCGSIEDARSVFDKSSMIDVVTWTAMIVGYTQSGQPVEALKLYTNKRWAGIWPNSMTIASVLSACAQLQDLCVGRSVHCLATVHGLDDAAVKHALIDMYAKCRMIGESRYIFESMKDKDVIAWNSIISGYFQNGCALEALRLFHQMRLESLSPDAVTLVSVISACASISAIAVGSSVHAYFIKEGLSSVNTYVGTALLNFYAKCGEALSAREVFDEMKDKNAVTWSSMIRGYGMHGDGDESFALFNDMLQENVEPNEVIFTAVLSACSHTGKVGEGWKYFTSMCREYNFVPTMKHYACMVDILARAGKLEEAVDFMEKMPIQPDITVLGAFVHGCSLHSKFDLGEIAARRMLKMHPNEACYYVLLYKLYASDGRWDKANEIRNLMKERRLSKSPGWSFTEMDACDQFPSFPASSTG*

Click here to download the sequence:
Link to NCBI Protein BLAST