Transcript Information: R_Transcript_16285.p1


Annotated TAIR IDAT2G17120.1
Annotated Gene Namelysm domain GPI-anchored protein 2 precursor
Annotated Gene Symbol(s)LYM2
Annotation TypeOrtholog
Chromosome Positionchr2:7459156-7460648 | Forward length=350
E-Value5.4E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 165.652559826521
Replicate 273.626284218425
Replicate 370.846832989692
Condition 2: 8 Hour
Replicate 146.308810894923
Replicate 232.918539580525
Replicate 334.858795992467
Condition 3: 24 Hour
Replicate 192.013917031992
Replicate 279.621239655373
Replicate 380.467794949707


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16285.p1 GENE.R_Transcript_16285~~R_Transcript_16285.p1 ORF type:complete len:377 (+),score=62.67,LysM|PF01476.16|1.4e+02,LysM|PF01476.16|6.8e-05,LysM|PF01476.16|3.6e-08 R_Transcript_16285:60-1133(+)
ATGACTAAAACCTCTTCTCATCTCCTCCCACATTTACTCTCTCTTCTGACCATCATACTTAGTGCCTCAGCTCAACCACCACCACCATCCTTCAAATGCACAACAAAATCCACATGTAAAGCTTTAGTTGGCTACACACCCACAAACTCCACAACACTAGGTCACATCCAAACCCTCTTTGAAGTCAAAACCCTCCGTTCAATCCTGGGTGTGAACAACCTCCATCTCTCAACCCCAGCAAATCATGTCATTCCAGCCAATCAAACCCTCAAAATCCCCATTCCTTGCCGTTGTTTCAATGGCACAGGCCTCTCCAATGGGGTCCCACGTTACACTATTGTCAAAGATGATGGGCTTTTCAACATTGCTAATCTTGTCTATGGTGGGCTTGTGACTTACCCACAAATCCAGGCTGCTAATCATATAAAGGACCCTAACTTGATCATTGAGGGCCATAAGCTGTGGATCCCACTCCCTTGTAGTTGTGATGAGGTTAATGGTGAGAAAGTGGTCCATTATGCTCATGTTGTGGCCCAAGGAAGTTCTGTTGATGAGATTGCTTCTGAGTTTGAAACTTCTCCGCAAACTTTGATGAATGTTAATGGGATTTCTGATCCTAAGAAGCTCATGGCTGGTCAAGTTCTTGATGTTCCTCTTAAAGCTTGCAACTCGAGCGTAAACAGCAGCTCCCCTGATTACCCGTTGCTCGTTGCCAATAACACTTATGTTTTCACTGCCAACAACTGTGTGATGTGCAAGTGTGATGCTACCAACAACTTTACGTTGCAATGTCAATCATCTGGACTAAAGCCTATAAACTGGCCAACTTGTCCTGCTGCGCAATGTCCGGATAATCTCTTGCTCGGAAACTCCACCAATCCTTCGGGCTGCCCCCGATCAACTTGCGCCTACACCGGTTATGGAAACCAAACCATTTTCACAACCCTTGCTGAGGATAACACTTGTTCTGCATCTGAAGCTCAGAATAATAGAGCATCGAAGAAGAATTTGAGAGGTTGGAGCTTGGCACTTGTATTCCTTTGCACACAGTTGCTGATGATGCAGAGATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16285.p1 GENE.R_Transcript_16285~~R_Transcript_16285.p1 ORF type:complete len:377 (+),score=62.67,LysM|PF01476.16|1.4e+02,LysM|PF01476.16|6.8e-05,LysM|PF01476.16|3.6e-08 R_Transcript_16285:60-1133(+)
MTKTSSHLLPHLLSLLTIILSASAQPPPPSFKCTTKSTCKALVGYTPTNSTTLGHIQTLFEVKTLRSILGVNNLHLSTPANHVIPANQTLKIPIPCRCFNGTGLSNGVPRYTIVKDDGLFNIANLVYGGLVTYPQIQAANHIKDPNLIIEGHKLWIPLPCSCDEVNGEKVVHYAHVVAQGSSVDEIASEFETSPQTLMNVNGISDPKKLMAGQVLDVPLKACNSSVNSSSPDYPLLVANNTYVFTANNCVMCKCDATNNFTLQCQSSGLKPINWPTCPAAQCPDNLLLGNSTNPSGCPRSTCAYTGYGNQTIFTTLAEDNTCSASEAQNNRASKKNLRGWSLALVFLCTQLLMMQRF*

Click here to download the sequence:
Link to NCBI Protein BLAST