Transcript Information: R_Transcript_162971.p1


Annotated TAIR IDAT2G16405.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7105915-7108787 | Reverse length=482
E-Value4.9E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.949421095757
Replicate 216.065351076107
Replicate 321.431682523673
Condition 2: 8 Hour
Replicate 116.787657407013
Replicate 216.685961070885
Replicate 318.839171628735
Condition 3: 24 Hour
Replicate 117.740123766862
Replicate 221.804630948639
Replicate 322.302244548392


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162971.p1 GENE.R_Transcript_162971~~R_Transcript_162971.p1 ORF type:5prime_partial len:264 (+),score=28.18,WD40|PF00400.28|0.055,WD40|PF00400.28|3.2e+02,WD40|PF00400.28|2.8e+03,WD40|PF00400.28|4.6e+02,WD40|PF00400.28|5.8,WD40|PF00400.28|0.066 R_Transcript_162971:1-792(+)
GACTTCGACTTCACAGCCAACAACCAGTACATAGCATCAACATCACTTGATAAAACTGTTAGAGTGTGGGACATTTCCAAAGGGCTCTGCATTCGGGTGATCTATGGAGTCTCATCACAATGGTGTATCCGTTTTCACCCTGTAAACAATAATTTTCTTTCAGTGGGGAATGCCAACAAGGAAATTAATGTTTATAATTTCAGTACCGGCAGATTGATTCATAAGCAAGTTGTTGATGATGAGGTTACCGCAATGGACCATGATCATACTGGCCAACTACTTTTTTGTGGTTATGCTCAGGGTTGTATACACACTATAAGCATGGACTCGCGTATGGGATCACTATCTCGCTCACATCGCAATCGGAATGGAAGGAAACGCGAGTCCCCTGTCACCGTGGTGGAGTACAGAACTTTCTCTTTGCTGGCACGAGGTCCAGTTTTGCTGACATGCACTCAAGATGGAAGTTTGTCATTCTTTAGTGTTGCCTTGGAAGTACGGGGTTATCTAACACTTCGTTGCTCTCTCAAGTTGACCCCACGAGTTCATAGAATCCGAGCTTCCTTCTGTCCTCTATTATCCCTTGAGAAGGGAGAGTTCATAGTTGCTGGAAGTGAGGACTCAAATGTGTACTTCTACGATTTGACTCGGCCAAAGCATACTTGTGTAAACAAGTTGCAGGGTCATGGTTCTTCAGTGATAAGTATCTCATGGAACTATGGAGAAAACTTGCTGGCGTCATCCGATTCTAGTGGTACAGTCATAGTATGGAAGAGATCAAAGACAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162971.p1 GENE.R_Transcript_162971~~R_Transcript_162971.p1 ORF type:5prime_partial len:264 (+),score=28.18,WD40|PF00400.28|0.055,WD40|PF00400.28|3.2e+02,WD40|PF00400.28|2.8e+03,WD40|PF00400.28|4.6e+02,WD40|PF00400.28|5.8,WD40|PF00400.28|0.066 R_Transcript_162971:1-792(+)
DFDFTANNQYIASTSLDKTVRVWDISKGLCIRVIYGVSSQWCIRFHPVNNNFLSVGNANKEINVYNFSTGRLIHKQVVDDEVTAMDHDHTGQLLFCGYAQGCIHTISMDSRMGSLSRSHRNRNGRKRESPVTVVEYRTFSLLARGPVLLTCTQDGSLSFFSVALEVRGYLTLRCSLKLTPRVHRIRASFCPLLSLEKGEFIVAGSEDSNVYFYDLTRPKHTCVNKLQGHGSSVISISWNYGENLLASSDSSGTVIVWKRSKTS*

Click here to download the sequence:
Link to NCBI Protein BLAST