Transcript Information: R_Transcript_162980.p1


Annotated TAIR IDAT2G16405.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7105915-7108787 | Reverse length=482
E-Value1.2E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1969929167255
Replicate 22.592135853864
Replicate 35.2317857472694
Condition 2: 8 Hour
Replicate 13.1740936042725
Replicate 23.9338588424308
Replicate 36.1625838526005
Condition 3: 24 Hour
Replicate 17.3691726903742
Replicate 24.8330968556512
Replicate 35.7421447481058


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_162980.p1 GENE.R_Transcript_162980~~R_Transcript_162980.p1 ORF type:3prime_partial len:324 (+),score=54.30,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|1.1e+04,WD40|PF00400.28|3.3e-06,WD40|PF00400.28|4e+03 R_Transcript_162980:196-1164(+)
ATGGCGGCCATCATAGACGACGAGAACGAGACTCTTCACCACCACCTCAAAACACACCAACAATATGAAGCAAATGACAAGACAGAGGAAGAGAAAGATACGAAGCTCAATTCGATAGACAAAAAATGCGAAGAAAAAGAAGAAGGTGAACAAAAGAGGAGAGAGAAAGACAAGAATGAGGAGGTTAAAGTAGAAGTAGATCCGGAGCTGTTCAGTTGTTTGCTTCAACCAATTGCTGCTGATTCTGATCTCGATTATATCGGTGTTCGTCGTCTTCTTCTCTACCGGAAAGATCAATCCGGTGTTTATCGCCGAAATGATTGGCGATGTAATGAAAGAGGATATGTGGCATACCGTAATTATATCAATAGACCGTGGAACTGGGAGAGCCTTCTTTTGCAAAGCCGCACGAGCACTCCTAATCAAAGTGGACGATGGGTTGCATCTCCAGCTCCACTTTCACTTTTGTACGAGGTTGACAGCTTGACGTTGAGCCGGGAATTGCGAGGTAGCAGCCATGCAAGAAATAGTTTCAGTTCAAGTACGAGTGACTATGACCGCTCCGACCGACCTCGGAAGAAAGCTGAACCTGCATATTCTTTTGTAGGAATGCATTGCATATTTGATCAGTGCAAAGTTGCAGTTACAATAATGAAGTTTGGGCACATGAGTTCTGATCTGCTGGCATATGGAGCTGCTGATGGATCTCTCACTGTATGCACTGTCGCAGAACCACCTACAGTCATCAAGGAATTGAGAGGCCATTCTAAAGATGTCACAGACTTCGACTTCACAGCCAACAACCAGTACATAGCATCAACATCACTTGATAAAACTGTTAGAGTGTGGGACATTTCCAAAGGGCTCTGCATTCGGGTGATCTATGGAGTCTCATCACAATGGTGTATCCGTTTTCACCCTGTAAACAATAATTTTCTTTCAGTGGGGAATGCCAACAAGGAAATTAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_162980.p1 GENE.R_Transcript_162980~~R_Transcript_162980.p1 ORF type:3prime_partial len:324 (+),score=54.30,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|1.1e+04,WD40|PF00400.28|3.3e-06,WD40|PF00400.28|4e+03 R_Transcript_162980:196-1164(+)
MAAIIDDENETLHHHLKTHQQYEANDKTEEEKDTKLNSIDKKCEEKEEGEQKRREKDKNEEVKVEVDPELFSCLLQPIAADSDLDYIGVRRLLLYRKDQSGVYRRNDWRCNERGYVAYRNYINRPWNWESLLLQSRTSTPNQSGRWVASPAPLSLLYEVDSLTLSRELRGSSHARNSFSSSTSDYDRSDRPRKKAEPAYSFVGMHCIFDQCKVAVTIMKFGHMSSDLLAYGAADGSLTVCTVAEPPTVIKELRGHSKDVTDFDFTANNQYIASTSLDKTVRVWDISKGLCIRVIYGVSSQWCIRFHPVNNNFLSVGNANKEIN

Click here to download the sequence:
Link to NCBI Protein BLAST