Transcript Information: R_Transcript_163163.p1


Annotated TAIR IDAT5G20480.1
Annotated Gene NameEF-TU receptor
Annotated Gene Symbol(s)EFR
Annotation TypeHomolog
Chromosome Positionchr5:6922497-6925679 | Forward length=1031
E-Value1E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43253461978007
Replicate 20.099508532778664
Replicate 30.59709505582388
Condition 2: 8 Hour
Replicate 10.34814025991344
Replicate 20.10597574332315
Replicate 30.12903988592692
Condition 3: 24 Hour
Replicate 10.59842625475058
Replicate 20.10452729332027
Replicate 30.51866598784117


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_163163.p1 GENE.R_Transcript_163163~~R_Transcript_163163.p1 ORF type:complete len:422 (+),score=48.85,LRR_8|PF13855.2|0.0035,LRR_8|PF13855.2|4e-09,LRR_8|PF13855.2|1.2e-05,LRR_8|PF13855.2|0.00024,LRR_8|PF13855.2|32,LRR_8|PF13855.2|0.12,LRRNT_2|PF08263.8|1.1e-14,LRR_4|PF12799.3|0.039,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|0.001,LRR_4|PF12799.3|0.27,LRR_4|PF12799.3|18,LRR_4|PF12799.3|1.8e+02,LRR_4|PF12799.3|14,LRR_4|PF12799.3|30 R_Transcript_163163:427-1692(+)
ATGTCATTGTTCTATCTCTCATTATTTGGCTTTGTCATTCTCATCCCAAATTTATTTCCATTCTTAGCATTTTCTCCCTTAAACCTTTTTGTAGAGTCAGCTACTTTGAGCATTAACTCAGATAGGGATGCCTTAATCTCGTTTCGATCCCAACTAAGCCTTGATCCTCCCAACCCTTTATCTTCATGGGACCAGAACTCGTCTCCTTGCAACTGGACAGGGGTTGTTTGCAACCGATTTGGTCATCGTGTCGTTGGTCTTAACCTGTCTAGCTTAGGACTTGTTGGATCCTTGAGCCCTCATATTGGTAATCTTTCCTTACTTCAGTCCCTACAACTCCAAGGAAACCAACTTAGTGGACCAATCCCAAATGAACTTTCCAATCTATATCACTTGAGAGTTCTTAACATGAGTTCAAACAACTTGCAAGGTACGATACCATCGAATATAAGCAAGTTGAGGGAGCTTATTGTTATGGACTTGATGAAAAATGAGATTGAAGAGAGTGTCCCCAGTGAGCTTAGCTTGCTTCCTAAGCTTCGAGTTTTGAACTTGGGAGGGAACAAACTGTCTGGTCATATTCCCCCTTCCATTGGTAATATCTCTTCACTTACCAATTTGAATTTGGGCACTAATTCTCTTAGTGGTCCCATTCCTAGTGAGCTATCCCACCTTCGAAGCCTCAGGCTTCTTGATGTCAGCATTAACACTCTCAGTGGCACAATTCCGACCTCAATCTATAACATGACATCATTAGTCTATTTGGTTGTGGCTTCAAACCGATTATGGGGTGAGCTTCCTTATGATGTGGGAGAAAGGCTTCCGAATCTTTTAGCCTTTAACTTCTGTATCAACAAGTTTACAGGGAGGATTCCTGGCTCCTTGCACAACCTTACGAATATCCAATTGATTCGTATGGCACATAACCGTCTTCATGGGAACATACCACCAGGTTTGGGTAAGCTTACCTCTTTGAATATGTACAACATTGGCTATAACAATATTGTTAGCTCTGGTGATAATTGGATTGATTTTGTAACTTCATTAGCCAACAATACCCAGCTCAATTTCCTTTCTTTTGAGGGCAATCATATAGAAGGAACTATCCCAGAATCCATTGGAAATCTATCTAAGGTTCTCTCAAGTTTATACATGGGAGAGAATCGTCTTCATGGTAGTATACCAAGATCTATTGGTCAACTTACTGGCCTGGCTTTGCTAAATATGAGGTTACTGGTCCGATCCCCAGTGAAATCAGCCAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_163163.p1 GENE.R_Transcript_163163~~R_Transcript_163163.p1 ORF type:complete len:422 (+),score=48.85,LRR_8|PF13855.2|0.0035,LRR_8|PF13855.2|4e-09,LRR_8|PF13855.2|1.2e-05,LRR_8|PF13855.2|0.00024,LRR_8|PF13855.2|32,LRR_8|PF13855.2|0.12,LRRNT_2|PF08263.8|1.1e-14,LRR_4|PF12799.3|0.039,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|0.001,LRR_4|PF12799.3|0.27,LRR_4|PF12799.3|18,LRR_4|PF12799.3|1.8e+02,LRR_4|PF12799.3|14,LRR_4|PF12799.3|30 R_Transcript_163163:427-1692(+)
MSLFYLSLFGFVILIPNLFPFLAFSPLNLFVESATLSINSDRDALISFRSQLSLDPPNPLSSWDQNSSPCNWTGVVCNRFGHRVVGLNLSSLGLVGSLSPHIGNLSLLQSLQLQGNQLSGPIPNELSNLYHLRVLNMSSNNLQGTIPSNISKLRELIVMDLMKNEIEESVPSELSLLPKLRVLNLGGNKLSGHIPPSIGNISSLTNLNLGTNSLSGPIPSELSHLRSLRLLDVSINTLSGTIPTSIYNMTSLVYLVVASNRLWGELPYDVGERLPNLLAFNFCINKFTGRIPGSLHNLTNIQLIRMAHNRLHGNIPPGLGKLTSLNMYNIGYNNIVSSGDNWIDFVTSLANNTQLNFLSFEGNHIEGTIPESIGNLSKVLSSLYMGENRLHGSIPRSIGQLTGLALLNMRLLVRSPVKSAN*

Click here to download the sequence:
Link to NCBI Protein BLAST