Transcript Information: R_Transcript_163230.p1


Annotated TAIR IDATMG00310.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)ORF154
Annotation TypeHomolog
Chromosome PositionchrM:90883-91347 | Reverse length=154
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.092186671488479
Replicate 20
Replicate 30.23138118783992
Condition 2: 8 Hour
Replicate 10.12366598458205
Replicate 20.11293374667265
Replicate 30.18334960222613
Condition 3: 24 Hour
Replicate 10.23189704270408
Replicate 20.33417058925117
Replicate 30.33163188919541


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_163230.p1 GENE.R_Transcript_163230~~R_Transcript_163230.p1 ORF type:5prime_partial len:198 (+),score=13.81 R_Transcript_163230:1-594(+)
AATTCTCTCATTGCAAAATTTTGGTGGGGTGGTTGTGGTGATGCACTTACTATTCACTGGAGGAGCTGGAAATTGATCTCGCAAGCGCGTGATCGGGGAGGACTAGGAATTCGTAACATTAAATGGTTTAACAAGGCTTTACTGGCTAAACAAGGTTGGAGGATTATGACAGAACCTAACTCGTTGTTGGGAAGGGTTATGGGAACCAAGTACAATTTAAGGGCGGAAACCTTTATGAACCGTACATATGTCAAAGAAGGTGCTAGCTCTTGGGGATGGAAAGGGGTTCTCTGGGGCTTAGAGATGGTACACTCGCAAGTAGGGTGGAAGGTGCGAAGTGGAACGAATGTTAATATCTGGCGTGACAGATCGGTTCAGGGTGAAGTGCCTCCACCAGCTCAAGCATGGTGCCAATACGATGGAGTAGTGACTGTGATGCGACCTACAAAGGTTTGCTCGCTTGTTAAGAGCCAACAATGGAATAGGGAACTGGTGGACACATTCTTTGATCCTCCATGGTCCAGTAGAATTAAAGCAATTTCGCTCCCACAAGTCCCTTATGGAGACAGACTGATTTGGTTGACCAATCACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_163230.p1 GENE.R_Transcript_163230~~R_Transcript_163230.p1 ORF type:5prime_partial len:198 (+),score=13.81 R_Transcript_163230:1-594(+)
NSLIAKFWWGGCGDALTIHWRSWKLISQARDRGGLGIRNIKWFNKALLAKQGWRIMTEPNSLLGRVMGTKYNLRAETFMNRTYVKEGASSWGWKGVLWGLEMVHSQVGWKVRSGTNVNIWRDRSVQGEVPPPAQAWCQYDGVVTVMRPTKVCSLVKSQQWNRELVDTFFDPPWSSRIKAISLPQVPYGDRLIWLTNH*

Click here to download the sequence:
Link to NCBI Protein BLAST