Transcript Information: R_Transcript_16328.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value0.0007
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.497909736055
Replicate 210.769867037066
Replicate 312.450485611085
Condition 2: 8 Hour
Replicate 110.255256377905
Replicate 212.943004548074
Replicate 313.197288662822
Condition 3: 24 Hour
Replicate 112.910390417462
Replicate 212.350944978723
Replicate 313.699128109917


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16328.p1 GENE.R_Transcript_16328~~R_Transcript_16328.p1 ORF type:complete len:425 (+),score=74.61,UBN2_2|PF14227.2|1.9e-23,UBN2|PF14223.2|2.1e-13 R_Transcript_16328:1008-2282(+)
ATGTCGACAGTTCCATATACAAGGTTCGGAATTGACTTTGTTGATGGCGGACTTGAAGTTTTTGATGGCAAGAATGACTTTGCATTTTGGCAATGTGAGGTGAGGGATGTGTTGGCGGTACAAGGGTTGAACATGGTAATAGAAAAAGACGCGAAGAAACCCGAGGAGATGAGGGATGGCCATTGGGAACTTCTTAAAGTTCGTGCACTACGTACCATACATCTAGCCCTTGCCCCGGAGATCAAGTGTCGTGTATCGTGTGAGCGAGACCCAAGGGTGTTGTGGAGTAAGTTGGAGAACATGCATGTGTCTAGATTGAATGGGCTACTTTTGAAGGTAGGTCTTTATGAACTAAAGATGGAGAAAGATGGAAATTTGTTGGAGCACATCAACAAGTTCAATGGCCTAATTGCTCAATTGTCAAATATGGGAGAAAAGTTCAAGGATGAGGATAAAGCTTTGATGTTGTTGGCTTCCTTGCCGAAGAAAAGGTACAATGTGGTGATTACAAACTTAGTAGTGGGTAAGTCAACTCTCACTATGCATGAAACTGTGACAGCTTTGCTAGATAATGAAAAGTTGATGACGACCTTCTCCTCAAGTGGTTCAAAAAGTGATGATAAAAGACATGTAGAGCATAAGAGAGGAAGAAGTAAGTCAAGAGGACTGCGTAACAACTCAAGAGATAAGAGTTCCAACTTTAGAGGGATGAAAGATTATAGTAAGTGTGTTTGTTATTACTGTGATGAAAAAGGGCACATTAGGTATACATGTGAAAAGTTTAAACGAGATATGCAAGAGGTGGTGGCTCAAAAAAGAAAGGGTGTCAAGGAAATGGGAGTGGTAGCTCTTGGTTTTGGTAGTGATACCAAAGATCATAAGCTAATGTGGAAGTCATGGGTTCTTGGCTTTGGTTGTTCCCATCATGCTGCAGTAAAGAAAGAAATGTTTAGCACATATGAAGGAGTAGAAAATGTGGAGGTAATATTGGCCAGCGGTGCAAAAGAAAAGGTAGAAGGAGTTGGTAGTGTTCAGTTGAAGGTCCATGATGGCCGAGTGAGGACTCTCGTCAATGTGATGCATATACCTACAATGATGACAAATTTTATAAGTTTGAGTATTCTTGATGCTCGTGGTTACTCTATTAATGGCGGAGATGGGGTATTGAAAGTCATCAAAGATAAATTGACTGTTTTGAAAGGATATATGAACAAGAATAACTTGTGTGTTGGATGGAAGCACTTACAAGCCAATGATAAAGCAGTAGAAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16328.p1 GENE.R_Transcript_16328~~R_Transcript_16328.p1 ORF type:complete len:425 (+),score=74.61,UBN2_2|PF14227.2|1.9e-23,UBN2|PF14223.2|2.1e-13 R_Transcript_16328:1008-2282(+)
MSTVPYTRFGIDFVDGGLEVFDGKNDFAFWQCEVRDVLAVQGLNMVIEKDAKKPEEMRDGHWELLKVRALRTIHLALAPEIKCRVSCERDPRVLWSKLENMHVSRLNGLLLKVGLYELKMEKDGNLLEHINKFNGLIAQLSNMGEKFKDEDKALMLLASLPKKRYNVVITNLVVGKSTLTMHETVTALLDNEKLMTTFSSSGSKSDDKRHVEHKRGRSKSRGLRNNSRDKSSNFRGMKDYSKCVCYYCDEKGHIRYTCEKFKRDMQEVVAQKRKGVKEMGVVALGFGSDTKDHKLMWKSWVLGFGCSHHAAVKKEMFSTYEGVENVEVILASGAKEKVEGVGSVQLKVHDGRVRTLVNVMHIPTMMTNFISLSILDARGYSINGGDGVLKVIKDKLTVLKGYMNKNNLCVGWKHLQANDKAVEK*

Click here to download the sequence:
Link to NCBI Protein BLAST