Transcript Information: R_Transcript_163311.p1


Annotated TAIR IDAT1G74630.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28030521-28032452 | Forward length=643
E-Value6.2E-230
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1477521087146
Replicate 20.8091880484983
Replicate 31.3009911819316
Condition 2: 8 Hour
Replicate 11.2913437903212
Replicate 21.0432054408667
Replicate 31.362291263599
Condition 3: 24 Hour
Replicate 11.8161348516845
Replicate 21.699999671079
Replicate 31.7758786764217


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_163311.p1 GENE.R_Transcript_163311~~R_Transcript_163311.p1 ORF type:5prime_partial len:493 (+),score=81.13,PPR|PF01535.16|0.42,PPR|PF01535.16|4.6e-05,PPR|PF01535.16|6.9e-06,PPR|PF01535.16|7.9e-06,PPR|PF01535.16|56,PPR|PF01535.16|0.0043,PPR|PF01535.16|6.7e-08,PPR|PF01535.16|0.013,PPR|PF01535.16|18,PPR|PF01535.16|4.4e+02,PPR|PF01535.16|1.8e+03,PPR_2|PF13041.2|33,PPR_2|PF13041.2|6.6e-06,PPR_2|PF13041.2|0.00085,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|0.079,PPR_2|PF13041.2|4.9e-09,PPR_2|PF13041.2|0.087,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|0.0009,PPR_3|PF13812.2|84,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.0047,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|9.3e+02,PPR_3|PF13812.2|1.4e+03,DYW_deaminase|PF14432.2|2.8e-33,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|0.00059,PPR_1|PF12854.3|0.0032,PPR_1|PF12854.3|0.0024,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.0092,PPR_1|PF12854.3|3.1,PPR_1|PF12854.3|41 R_Transcript_163311:1-1479(+)
GGGAAATGTGGGTGTATTGAGTATGCACGTAAGGTGTTTGATGAAATGCCTCAAAGGAATGTGGTTGCTTGGAATGCAATGCTGTCTGCTTGTTTTAGATTTGGGGATCTAAATTGCGCAGAGGAAGTGTTTAATGCAATGCCCAGTTGGGATTTGACCTCTTGGAATGTTATGTTGGCGGGGTATGCAAAGGCGGGGGAGGTGCAACTAGCTAAGGAGTTGTTTGCTAAGATGCCTGTTAAGGATGATGTCTCATGGAGTACGATCATTTTGGGGTTTGTGCAAAATGGGGATTTTGAGGACGCTTTTAGGGTGTTTGGGAAGCTGAGGAGCTTGGGATTCACTCCAAATGACGTGAGCTTGACGAGCGTCCTGTCTGCCTGTGCCCAAGCTGGGGCATTTGAATTTGGCAGAATATTGCATGGGTTTGTGGAGAAGGCAGGGTTTGGTTGGACGATCTCTGTGAATAATGCGCTATTGGATACTTATGCGAAAAGTGGGAATTTCAGTATGGCTAAGTTGATCTTTGAAAGAATGCCAGAGAAGACAAGTGTAGTTTCTTGGACATCGATGATTGCAGCCCTAGCTATGCATGGTTTTGGCGAGGAAGCCATTCAGCTTTTTCACAAGATGGAAGGCTCTGGGATAAAGCCTGATTCTGTTGCATTTGTATCAGTTCTTTATTGCTGTAGTCATGCTGGTATGGTTGAGGAAGGATGTGAGTATTTTGATAAGATGACGAATCTTTATGGTATACAGCCATCTATTGAACACTATGGATGCATGGTTGACTTATACGGAAGAGCTGGTCTATTGCAGAAAGACTATGATTTTGTAAAGCAATTGCCTGTACAAAAAAGTGCTACTATCTGGCGGATTCTGCTGGGGGCTTGCAGTATTCATAACGATTTTAAACTGGCACAAGAAGTAGAACTCCGGATTTCCGAAATTGAACCAAGCACTGCAGGAGACCATATGCTGTTGTCGAATATCTATGCCATTGCAGGGGAATGGAAAGCGTCTGCAGCCATGAGAAGATCCATGAGCAGCCTAGGTATCAGGAAGGAACCTGGTTGGAGTATGATCGAGGTTGACAAGATAATGTATACATTTGTAGCTGACAGTGAACTGAATGATGTAACAGAACAGGCATACGAAAAGCTGAGGGAAATAATGTTAAGGCTAAGAGTTGAAGGTGGTTATTTTCCTGAGACCCAGAACGTTTTGTATGATGTTGAAGATGAGGAAAAAGAAGAGACAGTGTCTAGACATAGCGAGAAGCTTGCTGTAGCATTTGGCTTGGTAAGATTGTCTCAGGAAAATGTCATAAGAATAGTGAAGAACTTGAGGATATGTAGGGATTGTCACAAAGTAATGAAATTAATCTCTAAAGTCTATTCGTTAAATATAGTGGTGAGGGACAGAAGCCGATTTCATTCCTTCAAAGATGGATCTTGCACATGTAGAGATTATTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_163311.p1 GENE.R_Transcript_163311~~R_Transcript_163311.p1 ORF type:5prime_partial len:493 (+),score=81.13,PPR|PF01535.16|0.42,PPR|PF01535.16|4.6e-05,PPR|PF01535.16|6.9e-06,PPR|PF01535.16|7.9e-06,PPR|PF01535.16|56,PPR|PF01535.16|0.0043,PPR|PF01535.16|6.7e-08,PPR|PF01535.16|0.013,PPR|PF01535.16|18,PPR|PF01535.16|4.4e+02,PPR|PF01535.16|1.8e+03,PPR_2|PF13041.2|33,PPR_2|PF13041.2|6.6e-06,PPR_2|PF13041.2|0.00085,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|0.079,PPR_2|PF13041.2|4.9e-09,PPR_2|PF13041.2|0.087,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|0.0009,PPR_3|PF13812.2|84,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.0047,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|9.3e+02,PPR_3|PF13812.2|1.4e+03,DYW_deaminase|PF14432.2|2.8e-33,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|0.00059,PPR_1|PF12854.3|0.0032,PPR_1|PF12854.3|0.0024,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.0092,PPR_1|PF12854.3|3.1,PPR_1|PF12854.3|41 R_Transcript_163311:1-1479(+)
GKCGCIEYARKVFDEMPQRNVVAWNAMLSACFRFGDLNCAEEVFNAMPSWDLTSWNVMLAGYAKAGEVQLAKELFAKMPVKDDVSWSTIILGFVQNGDFEDAFRVFGKLRSLGFTPNDVSLTSVLSACAQAGAFEFGRILHGFVEKAGFGWTISVNNALLDTYAKSGNFSMAKLIFERMPEKTSVVSWTSMIAALAMHGFGEEAIQLFHKMEGSGIKPDSVAFVSVLYCCSHAGMVEEGCEYFDKMTNLYGIQPSIEHYGCMVDLYGRAGLLQKDYDFVKQLPVQKSATIWRILLGACSIHNDFKLAQEVELRISEIEPSTAGDHMLLSNIYAIAGEWKASAAMRRSMSSLGIRKEPGWSMIEVDKIMYTFVADSELNDVTEQAYEKLREIMLRLRVEGGYFPETQNVLYDVEDEEKEETVSRHSEKLAVAFGLVRLSQENVIRIVKNLRICRDCHKVMKLISKVYSLNIVVRDRSRFHSFKDGSCTCRDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST