Transcript Information: R_Transcript_163315.p1


Annotated TAIR IDAT1G74630.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:28030521-28032452 | Forward length=643
E-Value5E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69979403021286
Replicate 20.1341616640019
Replicate 30
Condition 2: 8 Hour
Replicate 10.31291840188173
Replicate 20.57152413651593
Replicate 30.63791602819251
Condition 3: 24 Hour
Replicate 10.58678101540458
Replicate 20.42278451547432
Replicate 31.1188603034836


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_163315.p1 GENE.R_Transcript_163315~~R_Transcript_163315.p1 ORF type:3prime_partial len:313 (-),score=49.78,PPR|PF01535.16|1.8,PPR|PF01535.16|0.00081,PPR|PF01535.16|8.8e-06,PPR|PF01535.16|0.00027,PPR|PF01535.16|3.6e-07,PPR|PF01535.16|32,PPR_2|PF13041.2|0.00056,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|1.2e-10,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|5.3e-05,PPR_1|PF12854.3|1.1e+02,PPR_3|PF13812.2|0.75,PPR_3|PF13812.2|5.3e+03,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|48 R_Transcript_163315:3-938(-)
ATGTCAGTGACAGACAAAGTCTCCACTTTTTTCTCACAAAACTGCAGAAACTTGAAACAAATTAAGCAAATCCAAGCCTCAATTTACAAGACAGGCCTAGAAACAGACCCTCTCATTGCCGGAAAACTCATCCTAAACTGTGCCGTTTTGATCCCAAATGCTCTCAAATACGCCTCTCGCCTTCTCTCTCATGTCGAAGTTCCTGATGCATTTATGTTCAATGCCCTTATTCGGGGACTATCAGATTCAGATGCCCCTCAAAATTCTATGTTTACATACTCTGAAATGCGCCAAAAATTGGTTGCCCCAGATAGCTTTTCTTTCGTTTTTGCTCTCAAAGCAGCTGCCAATTCGAGGTCTTTAAAAGCTGGGATTCAGCTTCATTGTCAAGCTCTGGTGTTTGGGTTTAATACCCATCTTTTTGTTGGGACTACACTTACTAGCATGTATGGGGAATGTGGGTGTCTTGAGGATGCACGTAAGGTGTTTGATGAAATGCCTCAAAGGAATGTGGTTGCTTGGAATGCAATGCTGTCTGCTTGTTTTAGATGTGGGGATCTAAATTGCGCAGAGGAAGTGTTTAATGCAATGCCCAGTTGGGATTTGACCTCTTGGAATGTTATGTTGGCGGGGTATGCAAAGGCGGGGGAGGTGCAACTAACTAAGGAGTTGTTTGCTAAGATGCCTGTTAAGGATGATGTCTCATGGAGTACGATCATTTCAGGGCTTGTGCAAAATGGGGATTTTGAGGACGCTTTTAGGGTGTTTGGGAAGCTGAGGAGCTTGGGATTCACTCCAAATGACGTGAGCTTGACGAGCGTCCTGTCTGCCTGTGCCCAAGCTGGGGCATTTGAATTTGGCAGAATATTGCATGGGTTTGTGGAGAAGGCAGGGTTTGGTTGGACGATCTCTGTGAATAATGCGCTATTGGATACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_163315.p1 GENE.R_Transcript_163315~~R_Transcript_163315.p1 ORF type:3prime_partial len:313 (-),score=49.78,PPR|PF01535.16|1.8,PPR|PF01535.16|0.00081,PPR|PF01535.16|8.8e-06,PPR|PF01535.16|0.00027,PPR|PF01535.16|3.6e-07,PPR|PF01535.16|32,PPR_2|PF13041.2|0.00056,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|1.2e-10,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|5.3e-05,PPR_1|PF12854.3|1.1e+02,PPR_3|PF13812.2|0.75,PPR_3|PF13812.2|5.3e+03,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|48 R_Transcript_163315:3-938(-)
MSVTDKVSTFFSQNCRNLKQIKQIQASIYKTGLETDPLIAGKLILNCAVLIPNALKYASRLLSHVEVPDAFMFNALIRGLSDSDAPQNSMFTYSEMRQKLVAPDSFSFVFALKAAANSRSLKAGIQLHCQALVFGFNTHLFVGTTLTSMYGECGCLEDARKVFDEMPQRNVVAWNAMLSACFRCGDLNCAEEVFNAMPSWDLTSWNVMLAGYAKAGEVQLTKELFAKMPVKDDVSWSTIISGLVQNGDFEDAFRVFGKLRSLGFTPNDVSLTSVLSACAQAGAFEFGRILHGFVEKAGFGWTISVNNALLDT

Click here to download the sequence:
Link to NCBI Protein BLAST