Transcript Information: R_Transcript_163374.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50352995737155
Replicate 20
Replicate 31.263820005305
Condition 2: 8 Hour
Replicate 10.67547213647573
Replicate 20
Replicate 30.50073408607964
Condition 3: 24 Hour
Replicate 10.3166594100373
Replicate 20.60842093491248
Replicate 30.90569812497506


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_163374.p1 GENE.R_Transcript_163374~~R_Transcript_163374.p1 ORF type:3prime_partial len:145 (+),score=17.45,gag_pre-integrs|PF13976.2|2.4e-06,rve|PF00665.22|6e-06 R_Transcript_163374:208-639(+)
ATGAGAAGTTGTCAGGACCTCACTTCGAAGATGCCGATTGGAGTGGGTGAGCAACGAGGCGGGGTCTATTATTTTTGTGGTGCTGGAGTGGCAAATTCTTGCCGAGTTCGTAGCAAGGAGAGTGCAGAATTATTGCGTCAACAGCTAGGTCACCCATCATCAAAAATTGTTAGTTTGATTTCCAAGACTTCTAATAATTCTTTGGACAATAAGTTATGTGATGTTTGTTTGCGTGCTAAGCAAACTAGATATAGTTTTCCTTTAAGTAAAAATCGTGCTTTTGAGCCATTTCAATTAATACATTGTGATGTTTGGGGACAATATAGTGTTGCTTCTTCTTGTGGGGCATATTATTTTCTTACAATAGTTGATGATTACTCTCGAGCAATTTGGGTTCATTTGATGGCCAAAAAGAATGAAGTGTCACATTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_163374.p1 GENE.R_Transcript_163374~~R_Transcript_163374.p1 ORF type:3prime_partial len:145 (+),score=17.45,gag_pre-integrs|PF13976.2|2.4e-06,rve|PF00665.22|6e-06 R_Transcript_163374:208-639(+)
MRSCQDLTSKMPIGVGEQRGGVYYFCGAGVANSCRVRSKESAELLRQQLGHPSSKIVSLISKTSNNSLDNKLCDVCLRAKQTRYSFPLSKNRAFEPFQLIHCDVWGQYSVASSCGAYYFLTIVDDYSRAIWVHLMAKKNEVSHL

Click here to download the sequence:
Link to NCBI Protein BLAST