Transcript Information: R_Transcript_163411.p1


Annotated TAIR IDAT5G57030.1
Annotated Gene NameLycopene beta/epsilon cyclase protein
Annotated Gene Symbol(s)LUT2
Annotation TypeOrtholog
Chromosome Positionchr5:23077398-23079818 | Forward length=524
E-Value3.7E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8252960954719
Replicate 21.358584144584
Replicate 31.7516916985293
Condition 2: 8 Hour
Replicate 11.5843794965864
Replicate 21.5784151887896
Replicate 31.388064341559
Condition 3: 24 Hour
Replicate 10.54018369947539
Replicate 21.5568418040407
Replicate 32.0600192646492


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_163411.p1 GENE.R_Transcript_163411~~R_Transcript_163411.p1 ORF type:internal len:170 (+),score=22.23,Lycopene_cycl|PF05834.8|3.3e-47 R_Transcript_163411:3-509(+)
AAACCCCAAAACAGCAGCAACTTCTCAGGCTCCGATCGACGACCAAACGACCTCCGATCGTCGCCAAATTTTAGTATGTTGTTCCTGGGTCTTGCCTCTTCACATCTAACGGAGTGGTCTTATATACCTGTTGGTGGGTCCTTACCAAGTACTGAGCAAAGGAACCTTGCGTTTGGTGCTGCTGCAAGCATGGTGCACCCAGCCACAGGATATTCCGTTGTGAGATCATTATCAGAGGCTCCTAAGTATGCTTCTGCGATTGCAAATATAATCAGGAATGGAAAATCGCAAAATGCGATTTTGGTTCAGAGGAATGCAGAGAACATCTCAATGCAAGCGTGGAATACACTTTGGCCTCAAGAAAGGAAACGCCAAAGATCTTTCTTCCTATTTGGACTATCACTGATTGTGCAGCTTGATATTGATGGCATTAGGTCGTTTTTCCGCACTTTCTTCCAAGTGCCAAAATGGATGTGGGAGGGATTCCTTGGTTCTAGTCTCTCCTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_163411.p1 GENE.R_Transcript_163411~~R_Transcript_163411.p1 ORF type:internal len:170 (+),score=22.23,Lycopene_cycl|PF05834.8|3.3e-47 R_Transcript_163411:3-509(+)
KPQNSSNFSGSDRRPNDLRSSPNFSMLFLGLASSHLTEWSYIPVGGSLPSTEQRNLAFGAAASMVHPATGYSVVRSLSEAPKYASAIANIIRNGKSQNAILVQRNAENISMQAWNTLWPQERKRQRSFFLFGLSLIVQLDIDGIRSFFRTFFQVPKWMWEGFLGSSLSS

Click here to download the sequence:
Link to NCBI Protein BLAST