Transcript Information: R_Transcript_163571.p1


Annotated TAIR IDAT5G57580.1
Annotated Gene NameCalmodulin-binding protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23314994-23317683 | Reverse length=647
E-Value1E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7441971189167
Replicate 21.2113250240172
Replicate 32.4962470457346
Condition 2: 8 Hour
Replicate 11.1772050455406
Replicate 22.2934237785831
Replicate 32.2689513275484
Condition 3: 24 Hour
Replicate 11.9131506023087
Replicate 20.63620939107435
Replicate 32.5255043869497


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_163571.p1 GENE.R_Transcript_163571~~R_Transcript_163571.p1 ORF type:3prime_partial len:312 (+),score=64.14,Calmodulin_bind|PF07887.7|9.4e-84 R_Transcript_163571:99-1031(+)
ATGGCACTGAAGAGGGGTTTGGTCGGTGAGGCCACTCAGGATAGCAACCAACGATTTAAATTCACTAAGTGTTTGTGGAAAGATGAATGGCTGCAAAAATACTCAGCTCAGCTTGAGAATAACATCCGAAAAATGGTCAGAGAAGAGGCTGAGCAGGCAGTTCTGCGATCTATTCCAAGCTCAAGCTCAAGCTCATCCATCCCAAGGGCATTGCCAAATGAAGCTCAGCAAACTGAATCAAAAAAGTTCAAGTTGCACTTTGAGGGCAAGTTACCTTCTAGGCTATATACTGGAAACAATATAACAGCTGAGGGGCCTGTGCCTATCAAACTAGAGTTACAAGATGCACTATCAGGGCGTATTGTAGCAAATGGTCCCTCGTCTTTGCTAAAAGTCGAAATTGTGGCTCTACACGGCCATTTCAAGGCCGAGCAACTAGAGGAATGGACACAGAGCGATTTTGATGACAATATTGTACACGCGAGGGATGGTAAAAGGCCACTGTTGGTTGGGGAATGTGTAATTGCTTTGCATAATGGAATTGGCTTCATTGATGGGATTAACTTCACTGACAACTCCAGTTGGGTTAGAAGCAAAAAGTTTCGGTTGGGTGCAAGAGTGCTTCTAGCCAAAGATGATCAAGTAAAGGAAGCTGTGAGTGGTCCTTTTGAAGTTAAAGATCGTCGTGGAGAGATTTATCAGAAGCATGACACTCCATCACTGGAAGATGAGGTGTGGCGTTTGCACAAGATAGCAAAAGATGGGAAAATCTGTAAAAGGCTTGCAGAGCATCAAATTTTCAATGTCAGGGATTTCCTAAAACAGTATCAAATTGATCAGAACTTGCTGCGCCAAATTCTAAATGTGTCACCTAAAGTTTGGGAAGCAATAGCTCAACAAGCTAATTTATGCTTATCAAGCAATGTGCAGCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_163571.p1 GENE.R_Transcript_163571~~R_Transcript_163571.p1 ORF type:3prime_partial len:312 (+),score=64.14,Calmodulin_bind|PF07887.7|9.4e-84 R_Transcript_163571:99-1031(+)
MALKRGLVGEATQDSNQRFKFTKCLWKDEWLQKYSAQLENNIRKMVREEAEQAVLRSIPSSSSSSSIPRALPNEAQQTESKKFKLHFEGKLPSRLYTGNNITAEGPVPIKLELQDALSGRIVANGPSSLLKVEIVALHGHFKAEQLEEWTQSDFDDNIVHARDGKRPLLVGECVIALHNGIGFIDGINFTDNSSWVRSKKFRLGARVLLAKDDQVKEAVSGPFEVKDRRGEIYQKHDTPSLEDEVWRLHKIAKDGKICKRLAEHQIFNVRDFLKQYQIDQNLLRQILNVSPKVWEAIAQQANLCLSSNVQL

Click here to download the sequence:
Link to NCBI Protein BLAST