Transcript Information: R_Transcript_163653.p1


Annotated TAIR IDAT3G17670.2
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6040857-6042475 | Forward length=244
E-Value9.9E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2239113843471
Replicate 23.3933414814219
Replicate 34.3962425689585
Condition 2: 8 Hour
Replicate 13.8748675169041
Replicate 24.2914823735609
Replicate 35.0726723282563
Condition 3: 24 Hour
Replicate 15.1790339537245
Replicate 24.7526483804611
Replicate 34.9376303502428


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_163653.p1 GENE.R_Transcript_163653~~R_Transcript_163653.p1 ORF type:5prime_partial len:297 (+),score=48.69,TPR_11|PF13414.2|1.4e-06,TPR_11|PF13414.2|0.019,TPR_1|PF00515.24|7.7e+03,TPR_1|PF00515.24|1.9,TPR_1|PF00515.24|4.6,TPR_1|PF00515.24|0.0058,TPR_2|PF07719.13|0.91,TPR_2|PF07719.13|1.9,TPR_2|PF07719.13|0.087,TPR_19|PF14559.2|30,TPR_19|PF14559.2|0.00018,TPR_16|PF13432.2|12,TPR_16|PF13432.2|0.00055 R_Transcript_163653:2-892(+)
ATTAGTATACTCCAAGAAAAGAAAGAATTGTATTTTATGAAACAGGTGAGAGCATTACTCTCTAATCTGGGCGTCTGCGGGGCAAACATTCCGCAGATCAGTACCATGATCATGATGATGACCGAACCCACAAGCTTTCATCACTCCCAAATCATCTCCTTTGTCCCCATTTACAACATCACCAACAGTGGCACCAATACTAACCCCACAAACCCACCACCCCAGAACAACAAAAACAGAGAAATTGAGATAAGGGTATGCACCAACAGGACATGCAGGCGTCAAGGCTCACTTCAAGCCCTTGAAACCCTTGTGGGTCTTGCCCCGCCGCATGTCTCTGTCAAGCCCTGTGGTTGTCTCGGCCGTTGCGGTAGCGGCCCGAACCTCGTGGTCTTGCCGGACCCTGTCATGGTGGGCCACTGTGGAACTGCAACTCTGGCCGCTAGGCTCATGGTTGACATTTGTTGTGGCGGTGGAGATGATGAGGTTGCTATGAGGAGCTTGGAGGCTCTCAGTTTCAGGAAGAGGGCAGAGATTGAGCTTGAAAGGGAGAATTTTTCTGAAGCGGAGGCTCTATTTTCTAAGGTAATTGAAGCCAAACCAATTGGAGGTATTCATGCTGCATATAAGGGCAGGTCTGCTGTTAGGTTGTTGTCTGGCAATTTCACTGGAGCACTCGATGATGCCAATAAGGCTCTAACGTTATATGCACAATATGCTGAGGCTTACATTTGCCGAGGTGATGCTTTTTTAGCAATGAATCAACTAGAAGCTGCTGAGATATCATATACCATGGGATTGGAGAGTGATCCTTCTCTGCATCGTTCGAAGTCATTCAAGGCTCGTATAAAGAAACTTCAGGAGAAAATGACTTCCGCAGCTATGTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_163653.p1 GENE.R_Transcript_163653~~R_Transcript_163653.p1 ORF type:5prime_partial len:297 (+),score=48.69,TPR_11|PF13414.2|1.4e-06,TPR_11|PF13414.2|0.019,TPR_1|PF00515.24|7.7e+03,TPR_1|PF00515.24|1.9,TPR_1|PF00515.24|4.6,TPR_1|PF00515.24|0.0058,TPR_2|PF07719.13|0.91,TPR_2|PF07719.13|1.9,TPR_2|PF07719.13|0.087,TPR_19|PF14559.2|30,TPR_19|PF14559.2|0.00018,TPR_16|PF13432.2|12,TPR_16|PF13432.2|0.00055 R_Transcript_163653:2-892(+)
ISILQEKKELYFMKQVRALLSNLGVCGANIPQISTMIMMMTEPTSFHHSQIISFVPIYNITNSGTNTNPTNPPPQNNKNREIEIRVCTNRTCRRQGSLQALETLVGLAPPHVSVKPCGCLGRCGSGPNLVVLPDPVMVGHCGTATLAARLMVDICCGGGDDEVAMRSLEALSFRKRAEIELERENFSEAEALFSKVIEAKPIGGIHAAYKGRSAVRLLSGNFTGALDDANKALTLYAQYAEAYICRGDAFLAMNQLEAAEISYTMGLESDPSLHRSKSFKARIKKLQEKMTSAAML*

Click here to download the sequence:
Link to NCBI Protein BLAST