Transcript Information: R_Transcript_163823.p1


Annotated TAIR IDAT1G43760.1
Annotated Gene NameDNAse I-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16528880-16531065 | Reverse length=626
E-Value2E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.732329243452
Replicate 20.74702961360031
Replicate 31.023086690517
Condition 2: 8 Hour
Replicate 10.55607566117892
Replicate 20.33854476670985
Replicate 30.53589160802051
Condition 3: 24 Hour
Replicate 10.62564803951351
Replicate 20.51757231310212
Replicate 30.44736413818791


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_163823.p1 GENE.R_Transcript_163823~~R_Transcript_163823.p1 ORF type:complete len:1321 (+),score=271.57,RVT_1|PF00078.23|2.7e-37,zf-RVT|PF13966.2|2e-19,RVT_3|PF13456.2|5.1e+03,RVT_3|PF13456.2|8.1e+03,RVT_3|PF13456.2|7.4e+03,RVT_3|PF13456.2|4.6e-07 R_Transcript_163823:1946-5908(+)
ATGGTTGGTAAGGATAAGGCTAGAGACATTCTTCTCTCGCTGAAGTTTGATAATTTTGATTGCTCGCCGGCTGAAGGCAGGGCATGTGGTCTTGCCTTACTCTGGAATAATTGTATTAAAGCTGAACTAATATACAAGAGTGATCAACTATTTGGTGTTTATGTGGAAGAACCAGATTCGAGGAAGAATTGGATTATCAATTGTATTTACCGGTCACCAAATCATTGGGATAGAGTTGCTTTTTGGGATGCTTTGGACCTTATGCTTGCTCATAATAATCTTCCTATGTGCTTTATTGGTGATTTTAATGATATTATTGATCCATCCGAGAGATGGGGAGGTAATCCTTGGGCCGCCTCTTCTCAAGGTGGACTGAAGGGGTTGATAGACAGGAATGGGTTGATGGATGTTGAGTTCTCAGGACAAAGCTATACTTGGTTCATGCGTAGGGGTGGGAAAATTGTTATGAAGCAGAGGTTGGATAGAGCGGTGTGTAACTTGGAGTGGCGAGGGGTTTTTGAAAAAGCTGTAGTTCTCCACTTACCAGCTATTAAATCAGATCACTCCCCTTTGTTGATGGATACTATTGGTATGAAAGAGGCAGGGCCAACCCCTTTTCGTTTTGAGGCTATGTGGATTAGGGATGGCTCTTGTAAATCTGAGGTGGAAGAAGCCTGGAAGAAGGAGGTTTCTGGTTCTCAAGGTTTTAAGCTCAAAGGGAAACTCAGAAATACTAAGCTTGCGCTTAAAGTTTGGAATAAAGTTTCTTTTGGTCATGTGCGCAACAGGATTAAAGAGGTAATTTTCCAGATTGAACAACTGCAACAACGACCATCAAATTATCTTAGAGGGGCACAGGAGAGGGAGCTTTCGCATGAGCTTATGGAGCTTTATACCAGGGAGGCTATAATGGCTAGGCAGAAATCCAGGGTCATGTATTTGAAGGAGGGCGACCTCAACACCAAGTTTTTTCACCTTTCCACCATTCAGAGAAGAAGAAGGAACAATATTAGTGCTCTCAAAGTTGAGGAAGACTGGATCACGGACAGGGAGGATATTGCTCAAGCTTTTGATAATTTCTATCAGGAACTGTTTACCTCTTCTCAACCTGATCTTGATGAGTCTCTTTCTAATCTATTTCCTCACTGTTTGCCAGAGGATGCTAATACTTTTTTGGAAGCTATTCCTACTGCAGATGAGGTGGAATCTACTGTCCATAGTATTGGTTCTACAAAAAGTCCGGGTCCAGATGGGTTCCCTGCACTCTTTTTTCAGACTTATTGGGGTATTGTGGGAGAGCAAGTGGTGAGTATGGTTCAGGCCTTCTTTTCCTCTGGTTTTATGCTTAAGGAATTGAATCACACCTTTATTACTCTTATTCCCAAGACTGAAAAAGCTCATAGAGTCTCTGATTTCAGGCCTATTTCCCTTTGCAATGTTTCTTATAAGATCGTTTCTAAAATCTTGGCTACTGGAATGAAAGGTTTTTTGGATGGAATTATTAGTCCTTATCAGGCTGCTTTTGTTCCTGGTAGAGTAATTTCTGATAATACTGTTCTGATTAATGAAATTATGCATGTTATGAGGAAGAGTAAGGCAAAAGAAGGCCTTATGGCAATTAAGATTGACATGGCTAAGGCTTATGATAAGCTTGAATGGTCTTTTCTGACTAGAATTCTCAAGGAAGTGGGTTTCTCTGATAAAGTGGTGAAACTGATTGATCAATGCATTAGTACCACATCGTACTCATTACTTATTAATGGGAGACCTTCAAAAGTTTCAAGACCTCAGAGAGGGCTCAGGCAAGGGGATCCTTTATCTCTCTTCCTTTTTGTCATTGCTATGGAGGCTATATCTAGATTAGCTATAGACAAACAAGAGAAAGGTTTGCTACAGGGGATTTCTATTGATAAAAATTGTCAACCAATTTCTCACCTTATGTATGCAGATGATTTGGTTATGTTTGCTAGAGCAAATGAATCAAATGCTATATCTATTAGACAAATTTTGCAGATTATGGAGGATTGGAGTGGTTTGGCAGCAAATAAGGGCAAGTCAGGCATCTACTTCAGTAACTGTACAAATGTTGTTAATAAAATGAAGGTCAAATCACATCTTCAATTCAACAAAATGAATAAGGACTCGGTCTATCTTGGCCTCCCTATGTTCAGATCAAAGAAGAAATGTGAGAGGTTTACTTTTGTCAAAGAAAGGGTTGAAAAGAAGATCCACTCTTGGAAGGCAAAATCTTTGTCTTTTGCAGCTAGGGCTACTCTTATTCAAGCAGTTGTTGGTACGATTCCTTCTTATGCAATGACTACTAATAATATTCCTAAGAAGGTGTGTTCTGCTATTGATGCAAAGTTGAGATATTTCTGGTGGGGTTTTGATAAGGATAGGAAGGGGATTTATTTTAAGGCTTGGGACCAGATTTGTCGACCAAAGGCTCAAGGAGGTCTACAACTTAGGTTGATGAAAGACTTTAATGAGGCCTTACAAGCCAAGTTGTTCTGGCAGCTGGCTGCAGGGGAGAATAGAATCTGGGTACATCAGTTTAAAGAGAAGTATTGTCGGAGGTTTGGGGTGCTTAATGTTAAACCTTATCAAGGGAATTCTATCCAATGGAGAGAGATTCTGGGTGGTAGGATGGTTATTCAAAAGGGTATGTGTTACTTGGCTGGTGATGGCAAAGAGGTGAATATATGGACTGATCCCTGGGTTCCCAATATACCAGGGTTTAGACCAACTCAAAAGCAAGATGCTGAGATTACCTGTTTTAAAGTGGCTGACCTGATTGAAGGGGGTAGATGGAATGAAGAGTTAGTTAGAGCTCATTTTGAAAATACAGATGCTGAAGACATTCTGAGAATGGGTGTTGGGCAAGGTCCTGACCAAATTATTTGGACTCCTGAAGGTAAAGGCAACTTCACAGTAAAAAGTGCCTATAATTTGTTGTTACAAGGGAAGGAATTCAGTCAAGGGGAGTTTGAACCTAGTTTCTGGAGGAAAAATTGGAAATTAAATTTACCCTATAGATTGAGGATGTTCCTTTGGAGGGCAGCTGGGGACTGTTTACCACTCAAAGCTAACATAAAGAGTAGAATTCATGAGGCAGATGATTCTTGTGTTTTGTGTGGTACTGAAAGTGAATCTTTAACACACACTTTCTTTCTCTGTCAATTTTCCAGACTTCTTTGGTTCAAAATTCTTGGTCTGAGAACAGAATGTGGTGCTCAGTGGGGTAAGAAGCAGTGGTTGGAGACTTGTTTTAATGATGAATTTGTGAGCTTCCTAACAGGGTCCTCAAGAGAGGATGGTTTTAGACAATTCAGTATTTTGATGGATTGTATCTGGAGAGAAAGAAATAGGTGTTTACATGAGGGTGTGGCACCTGACCCAGAGCTCGTTTTTCAACAGTATTATAAATTCTGGGAGGAGGTCAAAGATATTAAAGGGGAGGGTGGAACTGCTACAAGTACCTCTCATCCTGTGGAGTTGGGGACTGGACCTTATTTTTGTACTGATGCTGCAGTTAGAGGTGGTTTCTCTCAGTGTGGTTGGGTGAGAGTTGATTCTTCTGGGGTTGTTGTTCAAGCAGAAACAAGGATTGCACATACTAAAATCCCTTTGGAGGCCGAATTACAGGGGATTTTGCTGCTGTGCAATTTTATCAGAGAGCATAATTTGGAGGGGGAAAGTATCTACAGTGATGCCAAAATTATTGTTGACCAATTGAAAAGGGGTCCCCCATTCCAATGGAGCATAAGAAGACAAATGGAGCTGCTTTGGCATGTTTTGCAGAAGACAGGGTGTTCAATTAACTTTATTCCTAGAAGATGTAATATGAATGCTCACAATTTAGTTGCTTGGTCTGTAGCTAAACATTTCTCTGGTTTCATTCCTCTTAGCAACTTGCATGAGGCTTGCAGTTATTCTCCTGTAAATACCTTTACAAAGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_163823.p1 GENE.R_Transcript_163823~~R_Transcript_163823.p1 ORF type:complete len:1321 (+),score=271.57,RVT_1|PF00078.23|2.7e-37,zf-RVT|PF13966.2|2e-19,RVT_3|PF13456.2|5.1e+03,RVT_3|PF13456.2|8.1e+03,RVT_3|PF13456.2|7.4e+03,RVT_3|PF13456.2|4.6e-07 R_Transcript_163823:1946-5908(+)
MVGKDKARDILLSLKFDNFDCSPAEGRACGLALLWNNCIKAELIYKSDQLFGVYVEEPDSRKNWIINCIYRSPNHWDRVAFWDALDLMLAHNNLPMCFIGDFNDIIDPSERWGGNPWAASSQGGLKGLIDRNGLMDVEFSGQSYTWFMRRGGKIVMKQRLDRAVCNLEWRGVFEKAVVLHLPAIKSDHSPLLMDTIGMKEAGPTPFRFEAMWIRDGSCKSEVEEAWKKEVSGSQGFKLKGKLRNTKLALKVWNKVSFGHVRNRIKEVIFQIEQLQQRPSNYLRGAQERELSHELMELYTREAIMARQKSRVMYLKEGDLNTKFFHLSTIQRRRRNNISALKVEEDWITDREDIAQAFDNFYQELFTSSQPDLDESLSNLFPHCLPEDANTFLEAIPTADEVESTVHSIGSTKSPGPDGFPALFFQTYWGIVGEQVVSMVQAFFSSGFMLKELNHTFITLIPKTEKAHRVSDFRPISLCNVSYKIVSKILATGMKGFLDGIISPYQAAFVPGRVISDNTVLINEIMHVMRKSKAKEGLMAIKIDMAKAYDKLEWSFLTRILKEVGFSDKVVKLIDQCISTTSYSLLINGRPSKVSRPQRGLRQGDPLSLFLFVIAMEAISRLAIDKQEKGLLQGISIDKNCQPISHLMYADDLVMFARANESNAISIRQILQIMEDWSGLAANKGKSGIYFSNCTNVVNKMKVKSHLQFNKMNKDSVYLGLPMFRSKKKCERFTFVKERVEKKIHSWKAKSLSFAARATLIQAVVGTIPSYAMTTNNIPKKVCSAIDAKLRYFWWGFDKDRKGIYFKAWDQICRPKAQGGLQLRLMKDFNEALQAKLFWQLAAGENRIWVHQFKEKYCRRFGVLNVKPYQGNSIQWREILGGRMVIQKGMCYLAGDGKEVNIWTDPWVPNIPGFRPTQKQDAEITCFKVADLIEGGRWNEELVRAHFENTDAEDILRMGVGQGPDQIIWTPEGKGNFTVKSAYNLLLQGKEFSQGEFEPSFWRKNWKLNLPYRLRMFLWRAAGDCLPLKANIKSRIHEADDSCVLCGTESESLTHTFFLCQFSRLLWFKILGLRTECGAQWGKKQWLETCFNDEFVSFLTGSSREDGFRQFSILMDCIWRERNRCLHEGVAPDPELVFQQYYKFWEEVKDIKGEGGTATSTSHPVELGTGPYFCTDAAVRGGFSQCGWVRVDSSGVVVQAETRIAHTKIPLEAELQGILLLCNFIREHNLEGESIYSDAKIIVDQLKRGPPFQWSIRRQMELLWHVLQKTGCSINFIPRRCNMNAHNLVAWSVAKHFSGFIPLSNLHEACSYSPVNTFTKE*

Click here to download the sequence:
Link to NCBI Protein BLAST