Transcript Information: R_Transcript_163827.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value3E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7039829359667
Replicate 22.3798366102568
Replicate 33.1407775497467
Condition 2: 8 Hour
Replicate 12.6858352775772
Replicate 23.0659344389194
Replicate 33.0529217131181
Condition 3: 24 Hour
Replicate 12.4762534304105
Replicate 22.5401852104321
Replicate 32.5208873771015


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_163827.p1 GENE.R_Transcript_163827~~R_Transcript_163827.p1 ORF type:complete len:547 (+),score=94.42,zf-RVT|PF13966.2|8.5e-19,RVT_3|PF13456.2|4.7e+03,RVT_3|PF13456.2|4.1e-06 R_Transcript_163827:167-1807(+)
ATGACAACCAACAATTTACCCAAGAAGGTGTGTACTGATATTGATGCTAAACATAGAGATTTTTGGTGGGGATTTGATAAAGATAGGAAATGGATTTATTTCAAGGCTTGGGAGCAGATTTGCAGGCCAAAAGTTGAAGGAGGCTTACAGCTAAGATTGATGAAGGACTTCAATGAGGCATTACAAGCCAAACTTTTCTGGCAATTGGCCTTAGGGGAAAGTAGAATGTGGATTAATCAATTCAAAGACAAGTATTGTAGGAGGTTTGGAATGCTTAATGTGGAACCTTGCCAGGGGGATTCTATCCAATGGAGAGAAGTACTGGGAGCTAGGAGGATTATTGAGAGGGGTAGTTGCTTTCTAATTGGGGATGGGAAAATGGTCAATATTTGGACTGATCCTTGGGTTCCCAATATTCCAGGCTTTAGACCAAGACAAAAACAAGATGCTGATATTACTTGTTTCCAGGTGGCAGATTTATTGGAGGGAGGTACATGGAATGAGGAGCTGGTTAAATCTCATTTTGAAGAACAAGATGCTGCTGAAATATTGAACTTAAGTGTAGGGAATGAACCAGATCAACTCATATGGACCCCTGAAAGAAAAGGTAATTTTACAGTTAGTAGTGCTTATAAACTGGTTCTACAAGGGAAGGATCTTGATCAAGGGGAGTTTGAGCCATGTTTTTGGAAGAAAGTCTGGAAGATGCAAGTGCCCTATAGAATGAGAATGTTTTTATGGAGAGCAGCTGCAGGTTGTTTGCCACTCATGACTAATATAAAGAACAGAATACATGAAGCAGATGATTCCTGTGTTATGTGTGGATGTGGAAGTGAATCATTCACCCATACCTTTTTCCTTTGTCTTTTTTCAAGGATGATTTGGTTTATAGTTTTTGGCCTGAGGACTGATTGTGGTTCCCATTGGGACAACAAACAATGGTTGGAGCAATGTTTTAATAATAACTTGTTTGCTCAACAAGCAGGGTTATCTTCTAAAAATGGTCACCGCAAGGTATGTATTATGATGGACTGTATCTGGAGGGAACGAAATAGATGCTTGCATGAGCATAAACAACCTGATGTGGATTTGGTGGTAACTCAGTTTTTCAAACTTTGGAATGAAGTCTTAGCCCTCAAGAGGGAAGATGGGATTACAGTAAACCAGTACCAGGCAGATCTGGTTTCTGGCCCCTATTTTTGTACAGATGCAGCAGTTAGAGGTGGGAGCGCGTTTTGTGGTTGGGTGCGAAGAGACATTTCTGGGGTTGTCACAGAAGCAGAAGTAATGTTAGCAAGTACTAGCTCCCCCCTTGAGGCTGAGTTGGAAGGGATTTTGTTGGTTTGCAAATTCATTAGAAAGGATGATTTAAGGGGACAAAGAATTTTCAGCGATGCAAAGATTATAACTGATCAACTGCAAAAGGGTCCCCCTTTCCAATGGATTATCAGAAGGAAAATGGAGGTGGTGTGGAAGATTTTGCAGGAGCAGAGCTGCACAATTAATTTTATCCCGAGGGACTTAAATGTGATTGCTCATAATCTTGTTGCATGGTCAGCCTTTAATAAGTTTTCTGGTTTTATTCCTGTTAATTTGCTGTCTGAAGCTTGTCATTTCTCTCATGTAAATGTTGCCTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_163827.p1 GENE.R_Transcript_163827~~R_Transcript_163827.p1 ORF type:complete len:547 (+),score=94.42,zf-RVT|PF13966.2|8.5e-19,RVT_3|PF13456.2|4.7e+03,RVT_3|PF13456.2|4.1e-06 R_Transcript_163827:167-1807(+)
MTTNNLPKKVCTDIDAKHRDFWWGFDKDRKWIYFKAWEQICRPKVEGGLQLRLMKDFNEALQAKLFWQLALGESRMWINQFKDKYCRRFGMLNVEPCQGDSIQWREVLGARRIIERGSCFLIGDGKMVNIWTDPWVPNIPGFRPRQKQDADITCFQVADLLEGGTWNEELVKSHFEEQDAAEILNLSVGNEPDQLIWTPERKGNFTVSSAYKLVLQGKDLDQGEFEPCFWKKVWKMQVPYRMRMFLWRAAAGCLPLMTNIKNRIHEADDSCVMCGCGSESFTHTFFLCLFSRMIWFIVFGLRTDCGSHWDNKQWLEQCFNNNLFAQQAGLSSKNGHRKVCIMMDCIWRERNRCLHEHKQPDVDLVVTQFFKLWNEVLALKREDGITVNQYQADLVSGPYFCTDAAVRGGSAFCGWVRRDISGVVTEAEVMLASTSSPLEAELEGILLVCKFIRKDDLRGQRIFSDAKIITDQLQKGPPFQWIIRRKMEVVWKILQEQSCTINFIPRDLNVIAHNLVAWSAFNKFSGFIPVNLLSEACHFSHVNVAF*

Click here to download the sequence:
Link to NCBI Protein BLAST