Transcript Information: R_Transcript_163887.p1


Annotated TAIR IDAT1G08830.1
Annotated Gene Namecopper/zinc superoxide dismutase 1
Annotated Gene Symbol(s)CSD1
Annotation TypeOrtholog
Chromosome Positionchr1:2827700-2829053 | Forward length=152
E-Value2.7E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1388.79999837535
Replicate 2454.09645802307
Replicate 3438.22235911071
Condition 2: 8 Hour
Replicate 1309.8342126658
Replicate 2376.62740199173
Replicate 3344.99923976526
Condition 3: 24 Hour
Replicate 1347.51817999583
Replicate 2369.89408047857
Replicate 3251.78013234601


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_163887.p1 GENE.R_Transcript_163887~~R_Transcript_163887.p1 ORF type:complete len:153 (+),score=53.76,Sod_Cu|PF00080.16|7e-50 R_Transcript_163887:226-684(+)
ATGGGGAAGGCCGTGGCAGTTCTAGGCAGCAGCGAGGGTGTTAGTGGAACTATCTACTTCACTCAAGAAGGAGATGGAGCAACAACTGTAACTGGAAATGTCTCGGGTCTCAAGCCTGGGCTTCATGGATTTCATGTTCATGCCCTAGGTGACACAACTAATGGATGCATGTCTACTGGACCACACTTCAATCCTGCTGGAAAAGAGCATGGTGCTCCAGAGGATGAGACTCGTCATGCTGGTGATCTTGGGAATATCACAGTTGGTGATGATGGTACTGCAACATTCACAATTATTGACAGCCAGATTCCCCTTACTGGACCAAACTCCATTGTTGGGAGGGCTGTTGTTGTCCATGCTGATCCCGATGATCTTGGAAGGGGAGGACATGAGCTTAGCAAGACCACTGGTAATGCTGGTGGAAGAGTAGCTTGTGGTATTATTGGTCTTCAAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_163887.p1 GENE.R_Transcript_163887~~R_Transcript_163887.p1 ORF type:complete len:153 (+),score=53.76,Sod_Cu|PF00080.16|7e-50 R_Transcript_163887:226-684(+)
MGKAVAVLGSSEGVSGTIYFTQEGDGATTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHADPDDLGRGGHELSKTTGNAGGRVACGIIGLQG*

Click here to download the sequence:
Link to NCBI Protein BLAST