Transcript Information: R_Transcript_163953.p1


Annotated TAIR IDAT3G11940.1
Annotated Gene Nameribosomal protein 5A
Annotated Gene Symbol(s)ATRPS5A, AML1, RPS5A
Annotation TypeOrtholog
Chromosome Positionchr3:3778175-3779354 | Reverse length=207
E-Value1.5E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3848089689582
Replicate 23.5873076088147
Replicate 33.5683862586971
Condition 2: 8 Hour
Replicate 11.1074009272623
Replicate 21.0112961636717
Replicate 30.54728474232322
Condition 3: 24 Hour
Replicate 11.2690245201243
Replicate 20.77581312680423
Replicate 32.4197462467927


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_163953.p1 GENE.R_Transcript_163953~~R_Transcript_163953.p1 ORF type:5prime_partial len:199 (+),score=21.30,Ribosomal_S7|PF00177.17|1.7e-37 R_Transcript_163953:3-599(+)
AAAATGGCCGCAGTTGAAGTTGTACCAAATGAAATCAAACTTTTTGGAAAATGGACTTACGAAGATGTTGAAGTCTCAGAAATTGCTTTGAAAGACTATGTCACTGTCAAATCAAAAGCCAACTTTTTACCACACACTGCTGGCAGATATAATGTTAAACGATTCCGAAAAGCCACTTGCCCCATCGTTGAACGAATGGTTAATTCACTCATGATGCACGGAAGAAACAACGGAAAGAAACTCATGGCTGTCCGAATTATGAAACACACTTTCGATATTATTCACTTACTCACTGATAAAAATCCACTCCAAGTTTTAGTAGATGCAGTCATTAACTCAGGACCACGAGAAGACTCCACTCGAGTTGGTACTGGAGGAACTGCAAGAAGACAAGCAGTCGATGTTTCACCAATCAGAAGAGTAAACTATGCAATCTACACCCTCACCACTGGTGCTAGAAAATCAGCTTTCAGAAACATCAAAACTATTTCTGAATGTCTTGCATTAGAACTCATTAACGCCTCAAAAGAATCCTCTAACAGTTTTGCAATCAAAAAGAAGGATGAAATTGAACGAGTTGCTAAATCAAACCGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_163953.p1 GENE.R_Transcript_163953~~R_Transcript_163953.p1 ORF type:5prime_partial len:199 (+),score=21.30,Ribosomal_S7|PF00177.17|1.7e-37 R_Transcript_163953:3-599(+)
KMAAVEVVPNEIKLFGKWTYEDVEVSEIALKDYVTVKSKANFLPHTAGRYNVKRFRKATCPIVERMVNSLMMHGRNNGKKLMAVRIMKHTFDIIHLLTDKNPLQVLVDAVINSGPREDSTRVGTGGTARRQAVDVSPIRRVNYAIYTLTTGARKSAFRNIKTISECLALELINASKESSNSFAIKKKDEIERVAKSNR*

Click here to download the sequence:
Link to NCBI Protein BLAST