Transcript Information: R_Transcript_164224.p1


Annotated TAIR IDAT2G31170.1
Annotated Gene NameCysteinyl-tRNA synthetase, class Ia family protein
Annotated Gene Symbol(s)SYCO ARATH
Annotation TypeOrtholog
Chromosome Positionchr2:13282559-13285616 | Reverse length=563
E-Value5.3E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34011728487054
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.30417223536951
Replicate 20.69443732426042
Replicate 30.33822876932398
Condition 3: 24 Hour
Replicate 10.42778522784542
Replicate 20.41096755696728
Replicate 30.13594847631613


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_164224.p1 GENE.R_Transcript_164224~~R_Transcript_164224.p1 ORF type:complete len:161 (+),score=12.02,tRNA-synt_1e|PF01406.15|1.1e-49 R_Transcript_164224:2-484(+)
ATGGGGATGTTTACTTTTCTGTTGACAAGTTCCCAGATTATGGCAAGTTGTCCAAACGAAAGCTTGAGGACAACAGAGCTGGTGAACGGGTTTCTGCGGATTCTAGAAAGCGACATCCTGCTGATTTTGCTTTATTCTGCAAAACCTGGTGAGCCAAGATGGGACAGTCCATGGGGTCCAGGAAGACCAGGATGGCACATTGAATGCAGTGCAATGAATGCTCAGTATCTGACATTCTCTTTTGATATTCACGGGGGTGGAATGGATTTAATCTTCCCTCATCATAAGAATGAGCTGGCACAGAGTTGTGCTGCTTGTGAAGAGACCCACATTAATTACTGGGTTCATAACGGGTTTGTGACCGTTAATGAAGAAAAAATGTCAAAGTCAACGGGCAATTTCTTTACTATTCGCGAGGTACAACATACATGCTGTTATCACTTGTTATGTTCATGTCTCTATTACTCTGTGTTTTTCTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_164224.p1 GENE.R_Transcript_164224~~R_Transcript_164224.p1 ORF type:complete len:161 (+),score=12.02,tRNA-synt_1e|PF01406.15|1.1e-49 R_Transcript_164224:2-484(+)
MGMFTFLLTSSQIMASCPNESLRTTELVNGFLRILESDILLILLYSAKPGEPRWDSPWGPGRPGWHIECSAMNAQYLTFSFDIHGGGMDLIFPHHKNELAQSCAACEETHINYWVHNGFVTVNEEKMSKSTGNFFTIREVQHTCCYHLLCSCLYYSVFFY*

Click here to download the sequence:
Link to NCBI Protein BLAST