Transcript Information: R_Transcript_164226.p1


Annotated TAIR IDAT1G09530.1
Annotated Gene Namephytochrome interacting factor 3
Annotated Gene Symbol(s)PIF3, POC1, PAP3
Annotation TypeOrtholog
Chromosome Positionchr1:3077216-3079367 | Forward length=524
E-Value5.8E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.75048884982691
Replicate 20.5857998647719
Replicate 30.53819060431489
Condition 2: 8 Hour
Replicate 11.8337431898818
Replicate 21.0507315989984
Replicate 30.93290216110653
Condition 3: 24 Hour
Replicate 11.2473404808004
Replicate 20.6153449617048
Replicate 30.73923231688493


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_164226.p1 GENE.R_Transcript_164226~~R_Transcript_164226.p1 ORF type:complete len:681 (+),score=131.06,HLH|PF00010.22|1e-13 R_Transcript_164226:124-2166(+)
ATGCCATTAACTGAACTCCTTAAGATGTACAAGGAAAGATTGGATTCCACCTACAAAGCAGCATCATCTTCAACTGATCCATCTTGTAGAACTGATACTGATTGTCTGGAGCTAGTATGGGAAAACGGTCAGATCGTGATGCAAAGTAGTAAAGCGAGAAAAGATAATGTTTCAAACAATTTCCAAACATTTATACCCAAGTCTCAAGACATTAGGAATGGTCAAGGTTCAAGAATTCCTAAGTTCGGCACTATGGATTCCGTATTGCCTGATTTTTCATTACCTGTTCCTTCTAGTGACATGGGGTTGGATCAAGGGATAGATATGGTATCTTGGTTGAATTATCCTATTGAAGATCAGTTGCACAATGATTGTACATCTGACTTCTTGCACGAGTTATCCGGGGTTACCATAAATGATCTGTCTACTGAGAACCATTTAGCATCCAGAGATAAAAAGAGTACTTCTCATGGTGAAGGTCATACAAGTGTTTTTGATAACAACATGAGCTTCAAATTTGGGAATACGCGCAAGGTCCTCCCAACTACTGAGAAACATACTAGAGATGGTGGTAGTAGTGAGGTGCCACAGTTTTCACCTCCTTTCCAGCATAATGTCCTGAAATCAGGCATTTCCAATGTCACTGAAAGTAATCCACGAAATCCCGAAAACCTAACTTCCCAAGAATCCATTCCTACTACATCTTCACTATCTGCTTTTACCAGCTTGAGATTGCAGAAGCTAGATGCAGGACAGCCTTGTACTAGTTCTGGCTTTACAAACTTCTCCTATTTTTCACGGCCCATTGTTGCCGCTAAAGCTCATCATCCGACTGTAAACAGCGCAAACAAATTGGAGAATGACAATAAGAGGTGTGCGTTCAGTAGCAATGCTGATTCTAATCTGGTTAGTGGTGGTGCCCAAAAGGATATACAGTTCCGTAATCAGCCTGTTCTGGCACCGGTCAATGGAACATCAAAGTTGTTGCCTGCAAAGTCTACTGAGGAGCTGATGTCTTCTAATCAAGCTACATACCTAGAAGTTGTTGCTAGAAATGATGCATCACAAAATCAAGCATGTGGTACGACAAACACAACTGCAAGGATGGTGGCTGAAAAGAATACAGAGACGGTGGTTTCATCGTCTTCTGTAGGTTCGGGTAACAATGTGGAGACAACTTCAAATGAGCCTGCACATAATTTGAAAAGAAAATATCGTGAAACCGGGGAATCAGAAGGTCCTAGTGAAGAGTTTGAAGAAGAATCTGTGGGTGCAAAAAAAGCTGCTCCTGCTCGAACAGGTGCAAAAAGAAGTCGAGCTGCGGAGGTGCATAATTTATCTGAAAGGAGACGAAGGGATAGAATTAATGAGAAAATGCGAGCACTACAAGAACTCATACCCAACTGCAATAAAGTCGACAAAGCTTCTATGCTTGATGAGGCCATAGAGTATTTGAAGACACTCCAGCTTCAAGTACAGATGTTGTCAATGGGTACCGGGTTGTACATGCAACCAATGATGATGCCGCCTGGAATGCAACCCATTCACGGGGCACATATGCCACATTTGTCGCCTATGGGGGTCGGAATGGGTATGGGCATGGGCTATGGGATGAATATGCTCGATGTGAATAGCGTTGTGAAAATGATGCCTTTCCAAGGCCCACATTATCCTGTTCCTGGAGCAGGGCCCAACTTTCACGGAATGCCAGGCTCTAGTATTCAAGCTTTTGGGCACCCTGGTCAAGGATTACCAATGGCCATGCAAAGACCACCAGTACTTCCAGTCTCATGTGTTCATTCTGCGAGCATGCCCATGGGACCAAACATACCAGGTGTGGCTGCTGCTACAGATGCCACACATTTAGCTCCACCTAGTAGTTCAAAGGATGTCAGTACTCAAGTGATGTCGAGTCAGGCTTCTAATAAGGCAACAAACGAGGATCTTGAGCATCCTAGTACATCCCACAATCAAGCTCAAGTTGTCAATGCCTCGTCTGAAGCTGCTCATACAATCAGTACAACCAACACTATGCCTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_164226.p1 GENE.R_Transcript_164226~~R_Transcript_164226.p1 ORF type:complete len:681 (+),score=131.06,HLH|PF00010.22|1e-13 R_Transcript_164226:124-2166(+)
MPLTELLKMYKERLDSTYKAASSSTDPSCRTDTDCLELVWENGQIVMQSSKARKDNVSNNFQTFIPKSQDIRNGQGSRIPKFGTMDSVLPDFSLPVPSSDMGLDQGIDMVSWLNYPIEDQLHNDCTSDFLHELSGVTINDLSTENHLASRDKKSTSHGEGHTSVFDNNMSFKFGNTRKVLPTTEKHTRDGGSSEVPQFSPPFQHNVLKSGISNVTESNPRNPENLTSQESIPTTSSLSAFTSLRLQKLDAGQPCTSSGFTNFSYFSRPIVAAKAHHPTVNSANKLENDNKRCAFSSNADSNLVSGGAQKDIQFRNQPVLAPVNGTSKLLPAKSTEELMSSNQATYLEVVARNDASQNQACGTTNTTARMVAEKNTETVVSSSSVGSGNNVETTSNEPAHNLKRKYRETGESEGPSEEFEEESVGAKKAAPARTGAKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMLSMGTGLYMQPMMMPPGMQPIHGAHMPHLSPMGVGMGMGMGYGMNMLDVNSVVKMMPFQGPHYPVPGAGPNFHGMPGSSIQAFGHPGQGLPMAMQRPPVLPVSCVHSASMPMGPNIPGVAAATDATHLAPPSSSKDVSTQVMSSQASNKATNEDLEHPSTSHNQAQVVNASSEAAHTISTTNTMPS*

Click here to download the sequence:
Link to NCBI Protein BLAST