Transcript Information: R_Transcript_164267.p1


Annotated TAIR IDAT4G01570.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:679487-681904 | Forward length=805
E-Value3.4E-296
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.352071181831
Replicate 21.1198026888692
Replicate 31.3574363019942
Condition 2: 8 Hour
Replicate 11.2333620862316
Replicate 21.2588348295779
Replicate 31.3714550246515
Condition 3: 24 Hour
Replicate 11.8366245782163
Replicate 21.5356995079365
Replicate 31.9779999791122


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_164267.p1 GENE.R_Transcript_164267~~R_Transcript_164267.p1 ORF type:complete len:675 (+),score=131.93,PPR_2|PF13041.2|4.2e-06,PPR_2|PF13041.2|0.66,PPR_2|PF13041.2|0.21,PPR_2|PF13041.2|1.1e-13,PPR_2|PF13041.2|0.0031,PPR_2|PF13041.2|5.1e-14,PPR_2|PF13041.2|6.7e-07,PPR_2|PF13041.2|3.6e-10,PPR_2|PF13041.2|2,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|6.7e-11,PPR_2|PF13041.2|1.4e-15,PPR_2|PF13041.2|1.8e-10,PPR_1|PF12854.3|0.02,PPR_1|PF12854.3|3e+02,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|4.1e-07,PPR_1|PF12854.3|5.6e-07,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|2.4e-09,PPR_1|PF12854.3|1.1e+04,PPR_1|PF12854.3|0.94,PPR_1|PF12854.3|0.00099,PPR_1|PF12854.3|4.1e-10,PPR_1|PF12854.3|5.7e-08,PPR_1|PF12854.3|2.6e+02,PPR|PF01535.16|0.0011,PPR|PF01535.16|7.8,PPR|PF01535.16|5e+03,PPR|PF01535.16|0.00073,PPR|PF01535.16|4.8e-05,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.00024,PPR|PF01535.16|2e-06,PPR|PF01535.16|4.1,PPR|PF01535.16|5.2e+02,PPR|PF01535.16|0.0067,PPR|PF01535.16|0.0016,PPR|PF01535.16|2.3e-09,PPR|PF01535.16|0.00013,PPR_3|PF13812.2|7.2e-05,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|4.6e+03,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|2,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|0.00039,PPR_3|PF13812.2|21,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|1.2e-07,PPR_3|PF13812.2|0.0037,MRP-S27|PF10037.5|0.3,MRP-S27|PF10037.5|0.39,MRP-S27|PF10037.5|39,MRP-S27|PF10037.5|1.3e+03,MRP-S27|PF10037.5|8.9,TPR_14|PF13428.2|78,TPR_14|PF13428.2|9.4e+03,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|2.2e+02,TPR_14|PF13428.2|1.1e+03,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|9.3e+02,ECSIT|PF06239.7|17,ECSIT|PF06239.7|29,ECSIT|PF06239.7|47,ECSIT|PF06239.7|4.5e+02,ECSIT|PF06239.7|4.9,TPR_19|PF14559.2|4.1,TPR_19|PF14559.2|1.5e+03,TPR_19|PF14559.2|1.5e+02,TPR_19|PF14559.2|17,TPR_19|PF14559.2|7.3 R_Transcript_164267:672-2696(+)
ATGAAGCATGATGGTGCTGTCATTGATTCAGACACCTTTAAGCTTCTCTTGGATGCTTTCATCAAGTCGGGTCAGATTGATTCTGCTCTTGAAGTTCTTGATCACATGGATGAATTGGGGGTGAGCTTGAATGTCCACATGTATAATTCTGTTGTCATCGCTCTAGTTCGAAAGAAAGAACTTGGTTTAGCTTTGACTATGTTTACCAAACTCCTAGAAACCTCAGGTGCTGTTGTCCCCTGTGAGCCAATTGCCTGCAATGAATTGCTTGTTTCTCTCAGAAGAGCTGGAATGAAGGCAGAGTTCAAGAAAGTTTTTGACATTTTAAGAGAAAAAAAGGTTGCGTTGGATACATGGGGATATAATATATGTATTCATTCATTTGGATGTTGGGGTGATCTAGAGACTTCTCTACATCTATTTAAAGAGATGAAGGAATCAAGTACAGGTTCATTTAGTGATCCTGATTTGTGTACGTATAACAGCCTCATCCACGTCCTATGCTTGGTTGGGAAAACAAAGGATGCACTCAATGTTTGGGAAGAGCTGAGATGCTCAGGACATGAGCCAGATGCCTTCACCTACCGTATACTAATTCAAGGCTGCTCCAAATCATATCGAGTTGAAGATGCAACTAAGATCTTTAACGAAATGCAGTGTAATGGTTTCCGACCAGATACCATTATATACAATTCTCTTCTGGATGTCTTTCTGAAGGCAAGGAAACTCACTGAAGCCTGCCAGCTTTTTGAGAGGATGACTCAAGATGGGATAAGGGCAACCTGTTGGACGTATAATATTCTTATTGATGGTTTGATTAAGAATGGGAGAGCTATTGCAGGTTACACCCTATTTTGTGATTTGAAAAAGAAGGGAAAGTTTGTGGATGGCATTACTTATAGCATTATCATTTTGCATCTCTGTAGAGAGGGCCAGCTTGATGAAGCATTTCAACTGGTCGAAGAGATGGAAGACAGAGGTTTCATTATTGATCTGGTGACTATAACTTCTCTCTTAATTGCGCTTTATAAGCAAGGTCGATGGGATGCAATGGAAAAGCTAATGAGACACATAAGAGAAGGGAATTTATTGCATAATGTTCTGAAGTGGAAAGCTGATATGGAAGCTGTAATGGCACATAAACAGAAAACTAGAAAAGATTTCAGCCCAATGTTTGCTGCTGAAGGTGACTTCAGCGAAATCGTGGATTTGATGTCAGGTGATGTTGAACCAGATAGCAACTTGCATTCCGGTAAAGACTTAGAGACAAACCCTGCAGATGTGGATGAGTGGTCATCATCCCCTTATATGGATTGGCTGGCAAATGAATTTAATCCCAATACCAATATCTTTAAATGGTTTTCCTTGTCCAAGGGAAAACGAGTTCAAGACAAAGGGATGAGCTCTTTTGATATTGACATGGTTAATACATACTTGTCCATATTTTTGTCAAAGGGGCAGTTGAGTGTAGCTTGCAAATTGTTTGCGATATTCACAGATATGGGTGCTGAAGCCATGAGTTACACATACAATTCTATCATGAGTTCATTTGTGAAGAAGGGTTATTTCAATCAGACATGGGGAATCCTCAATGAAATGGGTGAGAACCTTTGTCCAGCAGATGTAGCAACATATAACGTCATAATTCAAAGCTTGGGAAAAATGGGAAGAGCAGACCTAGCTAGCTCCATTCTAGAGAAGCTAATGAAGGAGGGTGGGTATCTTGACATAGTCATGTACAATACTCTCATGAATGTCCTTGGGAAGGCTGGTAGGGTTGATGAAGCTTGCAAATTGTTTGAGCAGATGAGAAATAGTGGGATAAATCCTGATGTTGTCACTTTCAATTCACTTATTGAAATTCATACGAAAGTGGGTAGAGTAAAAGATGCGCACAAATTTTTGAGGATGATGTTAGATGCTGGCTGTTTACCCAATCACGTAACTGATACAATATTGGATGTTCTTGGAAAAGAAATGGAGAAATCCAGGCACCAAAAGGGAACAACAAAGTTCACTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_164267.p1 GENE.R_Transcript_164267~~R_Transcript_164267.p1 ORF type:complete len:675 (+),score=131.93,PPR_2|PF13041.2|4.2e-06,PPR_2|PF13041.2|0.66,PPR_2|PF13041.2|0.21,PPR_2|PF13041.2|1.1e-13,PPR_2|PF13041.2|0.0031,PPR_2|PF13041.2|5.1e-14,PPR_2|PF13041.2|6.7e-07,PPR_2|PF13041.2|3.6e-10,PPR_2|PF13041.2|2,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|6.7e-11,PPR_2|PF13041.2|1.4e-15,PPR_2|PF13041.2|1.8e-10,PPR_1|PF12854.3|0.02,PPR_1|PF12854.3|3e+02,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|4.1e-07,PPR_1|PF12854.3|5.6e-07,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|2.4e-09,PPR_1|PF12854.3|1.1e+04,PPR_1|PF12854.3|0.94,PPR_1|PF12854.3|0.00099,PPR_1|PF12854.3|4.1e-10,PPR_1|PF12854.3|5.7e-08,PPR_1|PF12854.3|2.6e+02,PPR|PF01535.16|0.0011,PPR|PF01535.16|7.8,PPR|PF01535.16|5e+03,PPR|PF01535.16|0.00073,PPR|PF01535.16|4.8e-05,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.00024,PPR|PF01535.16|2e-06,PPR|PF01535.16|4.1,PPR|PF01535.16|5.2e+02,PPR|PF01535.16|0.0067,PPR|PF01535.16|0.0016,PPR|PF01535.16|2.3e-09,PPR|PF01535.16|0.00013,PPR_3|PF13812.2|7.2e-05,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|4.6e+03,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|2,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|0.00039,PPR_3|PF13812.2|21,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|1.2e-07,PPR_3|PF13812.2|0.0037,MRP-S27|PF10037.5|0.3,MRP-S27|PF10037.5|0.39,MRP-S27|PF10037.5|39,MRP-S27|PF10037.5|1.3e+03,MRP-S27|PF10037.5|8.9,TPR_14|PF13428.2|78,TPR_14|PF13428.2|9.4e+03,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|2.2e+02,TPR_14|PF13428.2|1.1e+03,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|9.3e+02,ECSIT|PF06239.7|17,ECSIT|PF06239.7|29,ECSIT|PF06239.7|47,ECSIT|PF06239.7|4.5e+02,ECSIT|PF06239.7|4.9,TPR_19|PF14559.2|4.1,TPR_19|PF14559.2|1.5e+03,TPR_19|PF14559.2|1.5e+02,TPR_19|PF14559.2|17,TPR_19|PF14559.2|7.3 R_Transcript_164267:672-2696(+)
MKHDGAVIDSDTFKLLLDAFIKSGQIDSALEVLDHMDELGVSLNVHMYNSVVIALVRKKELGLALTMFTKLLETSGAVVPCEPIACNELLVSLRRAGMKAEFKKVFDILREKKVALDTWGYNICIHSFGCWGDLETSLHLFKEMKESSTGSFSDPDLCTYNSLIHVLCLVGKTKDALNVWEELRCSGHEPDAFTYRILIQGCSKSYRVEDATKIFNEMQCNGFRPDTIIYNSLLDVFLKARKLTEACQLFERMTQDGIRATCWTYNILIDGLIKNGRAIAGYTLFCDLKKKGKFVDGITYSIIILHLCREGQLDEAFQLVEEMEDRGFIIDLVTITSLLIALYKQGRWDAMEKLMRHIREGNLLHNVLKWKADMEAVMAHKQKTRKDFSPMFAAEGDFSEIVDLMSGDVEPDSNLHSGKDLETNPADVDEWSSSPYMDWLANEFNPNTNIFKWFSLSKGKRVQDKGMSSFDIDMVNTYLSIFLSKGQLSVACKLFAIFTDMGAEAMSYTYNSIMSSFVKKGYFNQTWGILNEMGENLCPADVATYNVIIQSLGKMGRADLASSILEKLMKEGGYLDIVMYNTLMNVLGKAGRVDEACKLFEQMRNSGINPDVVTFNSLIEIHTKVGRVKDAHKFLRMMLDAGCLPNHVTDTILDVLGKEMEKSRHQKGTTKFTD*

Click here to download the sequence:
Link to NCBI Protein BLAST