Transcript Information: R_Transcript_164373.p2


Annotated TAIR IDAT5G50920.1
Annotated Gene NameCLPC Homologue 1
Annotated Gene Symbol(s)CLPC, ATHSP93-V, HSP93-V, DCA1, CLPC1
Annotation TypeOrtholog
Chromosome Positionchr5:20715710-20719800 | Reverse length=929
E-Value1.7E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48971358659002
Replicate 20.15363146646072
Replicate 30.44696073358346
Condition 2: 8 Hour
Replicate 10.17916486546765
Replicate 20.32723241718808
Replicate 30.92971664153202
Condition 3: 24 Hour
Replicate 10.44795721419911
Replicate 20.59172645803988
Replicate 30.21353858231119


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_164373.p2 GENE.R_Transcript_164373~~R_Transcript_164373.p2 ORF type:5prime_partial len:410 (+),score=63.83,Clp_N|PF02861.16|2.1e-16,Clp_N|PF02861.16|3.8e-18,AAA_16|PF13191.2|1.2e-05 R_Transcript_164373:3-1232(+)
GATCCATTCGCCTGCTCTTGCACTCAGACTCCGAGGAGCTTTCATGTTTCTCTTACTCCTTCTTGCATACATACTCTGTTATTAACCCAACTACCCTTTCACTTCTTCTTTCTTCTTATTGCTCGTAGTTGTTGCATTGCTATTACTATTGTTCCTACTACAAGTATAAGTATTTCTTACTCAGTTTTCCTGGTCGGAACCATGGCTAGTTCGGTATCACATTTGATTAAGATACCTGTTTCATTTCACTTTCAAAAAAGGAGTCAATTTCAAGGTTCTGGCAAAGGCATAAGCTCTGTAAAAATGTTGGCCGCTACACAGGCACCTAGATTAAGACTTCAAACTTTTTCGGGGTTGCGAGCAGGTACTACCCTTTTGGGCTCTTTGGGATCCTCCAGTGCCACAGATTTTTATTTGAAGATGAATGATGCCCTATTAGTTCGTAAAGGGACAGCAACAAGGGGTGTTGTTACAGCAATGTTTGAACGTTTTACTGAGAAAGCTATCAAAGTTATTCTGGTTGCACAAGAGGAGGCAAGGCGTTTAGGTCACAATGCAGTTGGCACTGAGCAAATCTTGCTAGGCCTTATAGGCGAAGGCACAGGCATTGCTGCGAAAGTTCTGAAGTCTGCAGGATTGAATATGAAAGATGTGCGTATTGAAGTTGAGAAGATAATTGGTAGGGGTGGCGGATTTATCTCTGTTGAGATTCCTTTTAGTCCTCGTGCCAAACGTGTTTTGGAACTCTCACTGGAAGAGGCACGCCAGCTTGGTCAAAACTATATTGGATCTGAACATCTGCTGCTGGGATTGCTTAGTGAAGGTGAAGGTGTAGCTGCTCGTGTCCTTGAGTCTTTAGGTGCTGATCCAAATGATATCCGTAAACAGGTCATACACATGATGGGTGAGAAAAAGGAGCCTGTTCTACATGTAGGTGATGCCCCTAATGGCAGTATGCCGACACTTCAAGAGTATGGGACAAATTTGACAATGGCGGCACAAGAGGGAAAATTAGATCCTGTTGTTGGAAGGCAGGAGCAAATAGAGCGTGTTATCCAAATACTTAGCCGTCGAGCCAAAAATAACCCTTGTCTCATTGGGCAACCTGGTGTTGGTAAAACATCAATTGCCGAGGGTCTAGCTCAAAGAATTGCTAGTGGTGACGTTCCAGAGACAATTGAAGGCAAGCAAGTTATAACTCGATATGAGTCGTCTTGTTGCTGGGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_164373.p2 GENE.R_Transcript_164373~~R_Transcript_164373.p2 ORF type:5prime_partial len:410 (+),score=63.83,Clp_N|PF02861.16|2.1e-16,Clp_N|PF02861.16|3.8e-18,AAA_16|PF13191.2|1.2e-05 R_Transcript_164373:3-1232(+)
DPFACSCTQTPRSFHVSLTPSCIHTLLLTQLPFHFFFLLIARSCCIAITIVPTTSISISYSVFLVGTMASSVSHLIKIPVSFHFQKRSQFQGSGKGISSVKMLAATQAPRLRLQTFSGLRAGTTLLGSLGSSSATDFYLKMNDALLVRKGTATRGVVTAMFERFTEKAIKVILVAQEEARRLGHNAVGTEQILLGLIGEGTGIAAKVLKSAGLNMKDVRIEVEKIIGRGGGFISVEIPFSPRAKRVLELSLEEARQLGQNYIGSEHLLLGLLSEGEGVAARVLESLGADPNDIRKQVIHMMGEKKEPVLHVGDAPNGSMPTLQEYGTNLTMAAQEGKLDPVVGRQEQIERVIQILSRRAKNNPCLIGQPGVGKTSIAEGLAQRIASGDVPETIEGKQVITRYESSCCWD*

Click here to download the sequence:
Link to NCBI Protein BLAST