Transcript Information: R_Transcript_16462.p1


Annotated TAIR IDAT5G59460.1
Annotated Gene Namescarecrow-like transcription factor 11 (SCL11)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23976968-23978291 | Reverse length=172
E-Value1E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2200601109776
Replicate 29.4250059646493
Replicate 38.6536564252131
Condition 2: 8 Hour
Replicate 17.7266507166863
Replicate 27.1554821891794
Replicate 36.7766012982778
Condition 3: 24 Hour
Replicate 19.3871922886612
Replicate 27.0576828449847
Replicate 37.1986228748018


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16462.p1 GENE.R_Transcript_16462~~R_Transcript_16462.p1 ORF type:5prime_partial len:225 (-),score=60.26,MPP6|PF10175.5|0.0018,MPP6|PF10175.5|0.071,MPP6|PF10175.5|1.1e+03 R_Transcript_16462:38-712(-)
CGCAGTGGTATGAATATGGACAGTAATGTTAGTAGAAAATGCATGGTCATCATGGAAGGAGATCCGCGTCCTGGGACTATTAGAGGTCGAATGTCATTCCAGAACTTCAATCCTTCTATTGAGAAATTGAGCGATGAGGCTGGCAATGATCATGAGGCAGAGGCTTCAACATCTTCTATCTTTCAGAGTGGGAGAAAAGTTGAAAGGGGAAATGGTGTATCAGAACGCAGTGGTATGAATATGGACAGTAATGTTAGTAGAAAATGCATGGTCATCATGGAAGGAGATCCGCGTCCTGGGACTATTAGAGGTCGAATGTCATTCCAGAACTTCAATCCTTCTATTGAGAAATTGAGCGATGAGGCTGGCAATGATCATGAGGCAGAGGCTTCAACATCTTCTATCTTTCAGAGTGGGAGAAAAGTTGAAAGGGGAAATGGTGTATCAGAACGCAGTGGTATGAATATGGACAATGGTGATGGAGAAGATAAAAGGAAACAGCCTGAGACAGGCTCTCAGACAAGCCATCTCAAGAAGAAACAGAAAAAGGACCTGGATTGTATGCAAACTTCCCCAAGTGAGAATCATAATTCTAAGAAGCAATCAAAGCGTGACAAGCTCGACTGGAATGTGTTGATGCAAAAGAAGATCAAAGGCAAGAGACAGGGAGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16462.p1 GENE.R_Transcript_16462~~R_Transcript_16462.p1 ORF type:5prime_partial len:225 (-),score=60.26,MPP6|PF10175.5|0.0018,MPP6|PF10175.5|0.071,MPP6|PF10175.5|1.1e+03 R_Transcript_16462:38-712(-)
RSGMNMDSNVSRKCMVIMEGDPRPGTIRGRMSFQNFNPSIEKLSDEAGNDHEAEASTSSIFQSGRKVERGNGVSERSGMNMDSNVSRKCMVIMEGDPRPGTIRGRMSFQNFNPSIEKLSDEAGNDHEAEASTSSIFQSGRKVERGNGVSERSGMNMDNGDGEDKRKQPETGSQTSHLKKKQKKDLDCMQTSPSENHNSKKQSKRDKLDWNVLMQKKIKGKRQGD*

Click here to download the sequence:
Link to NCBI Protein BLAST