Transcript Information: R_Transcript_16472.p1


Annotated TAIR IDAT5G62270.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25012227-25014486 | Forward length=420
E-Value1.2E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 167.279508973591
Replicate 251.420691653138
Replicate 363.987415764459
Condition 2: 8 Hour
Replicate 155.177513848062
Replicate 266.71304417081
Replicate 377.3068595568
Condition 3: 24 Hour
Replicate 184.811072981684
Replicate 277.345301839407
Replicate 383.028565713106


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16472.p1 GENE.R_Transcript_16472~~R_Transcript_16472.p1 ORF type:complete len:363 (+),score=63.18,MRP-L20|PF12824.3|1.6e-07,Bot1p|PF12298.4|1e+04,Bot1p|PF12298.4|7.1e-07 R_Transcript_16472:281-1369(+)
ATGCAATTTCTGAATCGCATAATCTCTCGAAACCCTTCCCCAATAACATCCATATCCAAGCATATACGCGACACCTCGTTTTCCCCCAATTTCAACCTCTTCAAAAATTCCAGGGTTTTCTCCACTGACGGCCCAAACAATGGCGACAATGAACAATGGAGCAGTATTACCGACGAAAAAAGCAGCAGCTTCGATTGGAACAACATGGAATCATCATCCTGGTCAACAGGCCTAACAAAGGACCATTTCGATGGCGAAGCCGTAGGTCATCAAGTCTCAGAATCATCTCAATCAGTCACTGCGAAGAAGAAACAAAAACATGATGAATCGGGCAATAACGATATTTTTACCAAGGAGATGAGGCTGGAGTACCAAAGGAGCAAGGATTATGTTAATAGTTTCGACGAAAGGTTGAAAGAGACTGCGTTTTTATTGAAGCAAGTGAGAGAGCCAGGTGCTCGAGGCTCGTACTTGAAGGACTCCGAAAAGGCCGAGATGTATCGGTTGCATAAGGAGAATCCTGAGGTTTATACTGTGGAGAAGTTGGCCAAGGATTTTAGGGTTATGAGACAAAGAGTACATGCTATTCTTTGGTTGAAACAGCTTGAGGAGGAAGAGGAGAAGAAATTAGGGCATCCTCTTGATGATTCCGTAGAGCTTTTGCTCGATACTTGCCTTGAATTCTTTAATTCACATGACAGAGAGTTCCATGTGGCATCACTTCCTTACAAACCTGATTTTAAAGTCATGCCCGAGGGTTGGGATGGCACCACTAGAGACCCTGATGAAGTACACTATGAGATATCAAAGAAGGAAGATGATATTTTGTATGAAGAATTCCTTCAAAGGTTTAACTTCAACAAGAAGAAGTTCGAGGGGGAGGTTAAAGTACACAAATATAGTAGGAGGCGGCCCTCGGATGGATGGAGTTTCACGGTAGAAAAGATGGGGCCTCGGGGTAAGCGTGGAGGTGGTGGTGGATGGAAGTTTGTGAGTCAACCAGATGGATCCACCCGGCCATTGAATGATATGGAGAAGATGTATGTCAAGAGGGAGACTCCTCGCCGCCGTCGAAGAATACTTCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16472.p1 GENE.R_Transcript_16472~~R_Transcript_16472.p1 ORF type:complete len:363 (+),score=63.18,MRP-L20|PF12824.3|1.6e-07,Bot1p|PF12298.4|1e+04,Bot1p|PF12298.4|7.1e-07 R_Transcript_16472:281-1369(+)
MQFLNRIISRNPSPITSISKHIRDTSFSPNFNLFKNSRVFSTDGPNNGDNEQWSSITDEKSSSFDWNNMESSSWSTGLTKDHFDGEAVGHQVSESSQSVTAKKKQKHDESGNNDIFTKEMRLEYQRSKDYVNSFDERLKETAFLLKQVREPGARGSYLKDSEKAEMYRLHKENPEVYTVEKLAKDFRVMRQRVHAILWLKQLEEEEEKKLGHPLDDSVELLLDTCLEFFNSHDREFHVASLPYKPDFKVMPEGWDGTTRDPDEVHYEISKKEDDILYEEFLQRFNFNKKKFEGEVKVHKYSRRRPSDGWSFTVEKMGPRGKRGGGGGWKFVSQPDGSTRPLNDMEKMYVKRETPRRRRRILP*

Click here to download the sequence:
Link to NCBI Protein BLAST