Transcript Information: R_Transcript_164789.p1


Annotated TAIR IDAT4G22745.1
Annotated Gene Namemethyl-CPG-binding domain 1
Annotated Gene Symbol(s)MBD1
Annotation TypeOrtholog
Chromosome Positionchr4:11947421-11948514 | Reverse length=204
E-Value4.1E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5398309303003
Replicate 25.2771450244172
Replicate 35.3898206108594
Condition 2: 8 Hour
Replicate 111.129938612384
Replicate 210.522767925264
Replicate 39.8038110837384
Condition 3: 24 Hour
Replicate 15.0335299269298
Replicate 25.1894726801358
Replicate 35.9693740055174


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_164789.p1 GENE.R_Transcript_164789~~R_Transcript_164789.p1 ORF type:complete len:187 (+),score=33.16,zf-CW|PF07496.11|2.9e-11,MBD|PF01429.15|1.4e-09 R_Transcript_164789:185-745(+)
ATGGAGATTCACAAGAAACAGAAAACTGAAGATGTTTACAAGCCCAGACGTATCGACTTGTATGCGATACAGTGCAGCAAATGCCTGAAATGGAGGAGCATCTCTACAAAGGAAGAGTACGAGGAACTGAGGAGCAAATTCCTAGAAGATCCATTCTACTGCAACAAGAAACCGGAAGTATCGTGTGATGATCCAGCAGACCTTGAATGTGATGCAACCCGAACTTGGGTAATCGACAAACCTAACCTTCCGCTGAGCCCAGAAGGATTCACAAGGGAGCTCATCTTGCGATCGGATTTCTCCAAGTTGGATGCTCATTATGTTACTCCAACTGTAAAGAAAGTGAGATGTCGGACAGAAGTAATAGAATTCTTGGAGAAACATCCCGAGTACAAACATATAAATGTTGATGACTTCAACTTTACTGTTCCAAAGATTAAGGAAGATACTATCCCTGAAAGTGCTCGAAAGAAGCTCGTTGAGAAATCAAGGAGCAAGAAGGAAGACGGCACCAGTCCTAATGTCAAGAAGAAAATTTCCAAGATAAAGAACTTAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_164789.p1 GENE.R_Transcript_164789~~R_Transcript_164789.p1 ORF type:complete len:187 (+),score=33.16,zf-CW|PF07496.11|2.9e-11,MBD|PF01429.15|1.4e-09 R_Transcript_164789:185-745(+)
MEIHKKQKTEDVYKPRRIDLYAIQCSKCLKWRSISTKEEYEELRSKFLEDPFYCNKKPEVSCDDPADLECDATRTWVIDKPNLPLSPEGFTRELILRSDFSKLDAHYVTPTVKKVRCRTEVIEFLEKHPEYKHINVDDFNFTVPKIKEDTIPESARKKLVEKSRSKKEDGTSPNVKKKISKIKNLT*

Click here to download the sequence:
Link to NCBI Protein BLAST