Transcript Information: R_Transcript_164941.p1


Annotated TAIR IDAT1G62720.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23227574-23229031 | Forward length=485
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60843203182396
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.49690848535968
Replicate 30.40336912489749
Condition 3: 24 Hour
Replicate 10.25508674697449
Replicate 20.24505843211753
Replicate 30.2431967187433


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_164941.p1 GENE.R_Transcript_164941~~R_Transcript_164941.p1 ORF type:5prime_partial len:90 (+),score=18.09,PPR_2|PF13041.2|6.5e-08,PPR_2|PF13041.2|2.5e-17,PPR_1|PF12854.3|76,PPR_1|PF12854.3|3.4e-12,PPR_1|PF12854.3|0.00061,PPR|PF01535.16|0.77,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|0.3,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|29 R_Transcript_164941:2-271(+)
GGTTGTGTTGAGGAAGCAAAATCCATATTTGACTTGATGACTATGAGGGATGTAAAGCCTAACGTTGTTACCTACAATTCCCTTTTGGATTTATACTGTTTGCTAGGCCAAGTGGATCAAGCATTTGAGTTTATGGATCTGATGACTAGAAATGGGTGCCAACCTGATGTTGTGATGCTCAACCCCATGTTCAATGGGTATTGCAAGAGTAGAAACCTTGAAAGCTTGATGAAGCTTTCAGGTTCAAGGATATGCCTTCTTAAGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_164941.p1 GENE.R_Transcript_164941~~R_Transcript_164941.p1 ORF type:5prime_partial len:90 (+),score=18.09,PPR_2|PF13041.2|6.5e-08,PPR_2|PF13041.2|2.5e-17,PPR_1|PF12854.3|76,PPR_1|PF12854.3|3.4e-12,PPR_1|PF12854.3|0.00061,PPR|PF01535.16|0.77,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|0.3,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|29 R_Transcript_164941:2-271(+)
GCVEEAKSIFDLMTMRDVKPNVVTYNSLLDLYCLLGQVDQAFEFMDLMTRNGCQPDVVMLNPMFNGYCKSRNLESLMKLSGSRICLLKD*

Click here to download the sequence:
Link to NCBI Protein BLAST